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Bastien CAZAUX

Téléphone : +33 4 67 41 85 85

Fax : +33 4 67 41 85 00

Site internet : Site perso

Statut : CDD Ingénieur-Technicien

Sujet de thèse :

Approximation de superchaîne, indexation et assemblage de génome

A linear time algorithm for Shortest Cyclic Cover of Strings
B. Cazaux and E. Rivals
Journal of Discrete Algorithms, Accepted, 2016.
Superstring Graph: a new approach for genome assembly
B. Cazaux, G. Sacomoto and E. Rivals
International Conference on Algorithmic Aspects in Information and Management, Accepted, 2016
Shortest DNA cyclic cover in compressed space
B. Cazaux, R. Canovas, E. Rivals
Data Compression Conference, Accepted, 2016.
The power of greedy algorithms for approximating Max-ATSP, Cyclic Cover, and superstrings
B. Cazaux, T. Lecroq, E. Rivals
Discrete Applied Mathematics, in Press, 2015.
Construction of a de Bruijn Graph for Assembly from a Truncated Suffix Tree
B. Cazaux, T. Lecroq, E. Rivals
9th International Conference on Language and Automata Theory and Applications (LATA), LNCS, vol. 8977, p. 109-120, 2015.
Reverse engineering of compact suffix trees and links: A novel algorithm
B. Cazaux, E. Rivals
Journal of Discrete Algorithms, vol. 28, p. 9-22, StringMasters 2012 & 2013 Special Issue, 2014.
From Indexing Data Structures to de Bruijn Graphs
B. Cazaux, T. Lecroq, E. Rivals
25th Annual Symposium on Combinatorial Pattern Matching (CPM 2014), Moscow, LNCS 8486, pp. 89-99, Springer Verlag, 2014.
Approximation of greedy algorithms for Max-ATSP, Maximal Compression, Maximal Cycle Cover, and Shortest Cyclic Cover of Strings
B. Cazaux, E. Rivals
Prague Stringology Conference (PSC 2014), Prague, 2014.

Seminar, séminaire de l'équipe AlGCo,
Montpellier, France, April 28, 2015
Data Compression Conference 2016,
Snowbird, Utah, March 29 - April 1, 2016
Workshop on Data Structures in Bioinformatics 2015/16,
Bielefeld, Germany, February 23-24, 2016
Seminar, séminaire de l'équipe MAB,
Montpellier, France, October 2, 2015
Conference on Language and Automata Theory and Applications 2015,
Nice, France, March 2-6, 2015
London Stringology Days/London Algorithmic Workshop 2015,
London, England, February 5-6, 2015
Data Structures in Bioinformatics,
Montpellier, France, December 8-9, 2014
Seqbio 2014,
Montpellier, France, November 4-5, 2014
Prague Stringology Conference 2014,
Prague, Czech Republic, September 1-3, 2014
Seminar, Semindoc : le séminaire des doctorants,
Montpellier, France, March 3, 2014
StringMasters, Working Full-time on Strings - WFS - 2014,
Rouen, France, February 3-5, 2014
Seqbio 2013,
Montpellier, France, November 25-26, 2013

Dernière mise à jour le 14/09/2020

Département : Informatique

Responsable : Eric Rivals