Query= MAL13P1.243 Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding) elongation
factor Tu, putative
(1394 letters)
>YNL163C RIA1 SGDID:S000005107, Chr XIV from 330075-326743, reverse
complement, Verified ORF, "Cytoplasmic GTPase involved
in biogenesis of the 60S ribosome; has similarity to
translation elongation factor 2 (Eft1p and Eft2p)"
Length = 1110
Score = 158 bits (400), Expect = 2e-42
Identities = 109/365 (29%), Positives = 167/365 (45%), Gaps = 66/365 (18%)
Query: 207 INIIDTPGHVDFSSEVSTCIRICDGALILVDCIEGLCSQTKIVLRQSWKEMIKTILVINK 266
+N+ID+PGH+DFSSEVS R+CDGA++LVD +EG+CSQT VLRQ W E +K ILV+NK
Sbjct: 98 VNLIDSPGHIDFSSEVSAASRLCDGAVVLVDVVEGVCSQTVTVLRQCWTEKLKPILVLNK 157
Query: 267 IDKLITNQNMDSISAYEHINNIIEQVNAYIYQLYIEENM-----------DNENVE--TK 313
ID+LIT + AY H++ +IEQVN+ I + E NEN E K
Sbjct: 158 IDRLITELQLTPQEAYIHLSKVIEQVNSVIGSFFANERQLDDLFWREQLEKNENAEYIEK 217
Query: 314 NELEKYSYSPLKGNVLLCSSIHCWCIDMDIFCYSFCKKMNIDTSNSDKIKKYMWNQYYFN 373
++ Y ++P NV+ S+I W ++ + +K+ N ++K +W +Y +
Sbjct: 218 DDSGIY-FNPTDNNVIFASAIDGWGFNIGQLAKFYEQKLGAKREN---LQKVLWGDFYMD 273
Query: 374 VKEKKILKIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL 433
K KKI+ L
Sbjct: 274 PKTKKIIN----------------------------------------NKGLKGRSLKPL 293
Query: 434 FSLVVLDFLWKIYDITIINRDDEQIKKLCRELNICDSFIXXXXXXXXXXXTYILTYIMSR 493
F+ ++L+ +WKIY I +RD E ++K+ + LNI +L IM +
Sbjct: 294 FTSLILENIWKIYQNIITSRDSEMVEKIAKTLNI----KLLARDLRSKDDKQLLRTIMGQ 349
Query: 494 FLNLSRSIFNACIEIFPSPKNIDENRLFKIYPS-----LYNDEIYKHIINCSTQKFTIIY 548
+L +S ++ IE PSP +RL I S + + K + C + Y
Sbjct: 350 WLPVSTAVLLTVIEKLPSPLESQTDRLNTILVSESDTAAMDPRLLKAMKTCDKEGPVSAY 409
Query: 549 ISKYI 553
+SK +
Sbjct: 410 VSKML 414
Score = 107 bits (266), Expect = 8e-27
Identities = 71/221 (32%), Positives = 118/221 (53%), Gaps = 4/221 (1%)
Query: 1174 YLNNICLGFKLASKYGPIAQEPIRGTLFIIEGLIIDEESKDEMFEDVNSNEENTEEKINA 1233
Y ++I GF+LA GP+A EP++G ++E + + + E ED + + +
Sbjct: 893 YSDSIKNGFQLAVSEGPLANEPVQGMCVLVESVHKMSQDEIESIEDPRYQQHIVDL---S 949
Query: 1234 GNIIALMKEACLNSMQQNKLRIFEPMLRLNLTCESTVLGKVYNVLLKRRCSILSEEIKDG 1293
G +I ++A + RI + ++ VLGKVY V+L+R I+SEE+K+G
Sbjct: 950 GRLITSTRDAIHEAFLDWSPRIMWAIYSCDIQTSVDVLGKVYAVILQRHGKIISEEMKEG 1009
Query: 1294 YFLYCIDAYLPLFNSFKLAEELRSKCSGNVIYDIQFSHWNKLNEDIFLLNDTSTFIYDED 1353
+ I+A++P+ +F L+E++R + SG + FS + ++ D F + T + +E
Sbjct: 1010 TPFFQIEAHVPVVEAFGLSEDIRKRTSGAAQPQLVFSGFECIDLDPFWVPTTEEEL-EEL 1068
Query: 1354 FDVKLMENTATDIVNYIRRAKGLETNEKIMQKPEKQCTLKK 1394
D EN A +N IRR KGL EK+++ EKQ TLKK
Sbjct: 1069 GDTADRENIARKHMNAIRRRKGLFIEEKVVENAEKQRTLKK 1109
Score = 57.4 bits (137), Expect = 8e-12
Identities = 31/64 (48%), Positives = 38/64 (59%)
Query: 8 SDNDKIRNICILAHVDHGKTTLVDXXXXXXXXXXXXXXXXXXYLDSREDEQKRQITMKSS 67
+D IRNICI+AHVDHGKT+L D +LD+R DEQ R ITM+SS
Sbjct: 14 NDPSCIRNICIVAHVDHGKTSLSDSLLASNGIISQRLAGKIRFLDARPDEQLRGITMESS 73
Query: 68 SILL 71
+I L
Sbjct: 74 AISL 77
Score = 54.7 bits (130), Expect = 5e-11
Identities = 28/78 (35%), Positives = 42/78 (53%)
Query: 793 ILHTIIEPRNIQDMNKFLYGLILLYTCDTSIDIDFNEKGEYILKFCGEIHMQKCLSDFVN 852
I+ +EP N +M+K + GL LL D + GE+IL GE+H+++CL D
Sbjct: 678 IVRVAVEPANPVEMSKLVRGLKLLDQADPCVHTYVENTGEHILCTAGELHLERCLKDLTE 737
Query: 853 IYSNIEIKTSDANISIRE 870
++ IEI S+ I RE
Sbjct: 738 RFAGIEITHSEPAIPYRE 755
Score = 21.6 bits (44), Expect = 0.46
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 609 MGGDLIPIRYAYAGNIVAL 627
MG +L+P+ +GNIV +
Sbjct: 627 MGKELVPLDVCPSGNIVGI 645
Score = 20.8 bits (42), Expect = 0.79
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 888 DNLKILYDYYLKIQSTVGVTECSQKNQDNDINNN 921
DN K D Y + + TV E ++ + NN
Sbjct: 465 DNSKNTSDLYKRAKDTVMTPEVGEQTKPKPSRNN 498
Score = 17.3 bits (33), Expect = 8.7
Identities = 5/11 (45%), Positives = 8/11 (72%)
Query: 1219 DVNSNEENTEE 1229
D+N N +NT +
Sbjct: 462 DLNDNSKNTSD 472
Score = 17.3 bits (33), Expect = 8.7
Identities = 6/12 (50%), Positives = 8/12 (66%)
Query: 844 QKCLSDFVNIYS 855
++CL F IYS
Sbjct: 579 EECLVAFARIYS 590
Lambda K H
0.319 0.136 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 3074
Number of extensions: 145
Number of successful extensions: 14
Number of sequences better than 10.0: 1
Number of HSP's gapped: 9
Number of HSP's successfully gapped: 9
Length of query: 1394
Length of database: 1110
Length adjustment: 48
Effective length of query: 1346
Effective length of database: 1062
Effective search space: 1429452
Effective search space used: 1429452
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 33 (18.0 bits)
S2: 33 (17.3 bits)