>YOL038W PRE6 SGDID:S000005398, Chr XV from 255336-256100, Verified
           ORF, "20S proteasome alpha-type subunit"
          Length = 254

 Score =  241 bits (615), Expect = 1e-68
 Identities = 116/245 (47%), Positives = 176/245 (71%), Gaps = 6/245 (2%)

Query: 3   YDRAITVFSPDGHLLQVEHALEAVKKGGCAVAIKSSNFAVLAVEKKNIPKLQNPKTT-EK 61
           YDRA+++FSPDGH+ QVE+ALEAVK+G CAV +K  N  VL  E+++  KLQ+ + T  K
Sbjct: 4   YDRALSIFSPDGHIFQVEYALEAVKRGTCAVGVKGKNCVVLGCERRSTLKLQDTRITPSK 63

Query: 62  LIKLDEHNCLAFAGLNADARVLVNKTRLECQRYYLNMDEPAPVDYIAKYVAKVQQKFTHR 121
           + K+D H  L+F+GLNAD+R+L+ K R+E Q + L +++P  V+Y+ +YVA VQQ++T  
Sbjct: 64  VSKIDSHVVLSFSGLNADSRILIEKARVEAQSHRLTLEDPVTVEYLTRYVAGVQQRYTQS 123

Query: 122 GGVRPFGIATLIAGF-KNNKEICIYQTEPSGIYAAWKAQAIGKNAKIVQEFLEKNYQEN- 179
           GGVRPFG++TLIAGF   + E  +YQTEPSGIY++W AQ IG+N+K V+EFLEKNY    
Sbjct: 124 GGVRPFGVSTLIAGFDPRDDEPKLYQTEPSGIYSSWSAQTIGRNSKTVREFLEKNYDRKE 183

Query: 180 --MEQKDCIFLALKAIFEVVELSSKNVEVALL-TEKDLTFIEEQEINSMVELIDQERTKN 236
                ++C+ L ++++ EVV+  +KN+E+ ++  + D+  +  +EIN  V  I+QE+ + 
Sbjct: 184 PPATVEECVKLTVRSLLEVVQTGAKNIEITVVKPDSDIVALSSEEINQYVTQIEQEKQEQ 243

Query: 237 NEQNE 241
            EQ++
Sbjct: 244 QEQDK 248

Lambda     K      H
   0.316    0.132    0.371 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 221
Number of extensions: 12
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 254
Length adjustment: 24
Effective length of query: 217
Effective length of database: 230
Effective search space:    49910
Effective search space used:    49910
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 20 (12.1 bits)
S2: 20 (12.3 bits)