>YOL033W MSE1 SGDID:S000005393, Chr XV from 263476-265086, Verified
           ORF, "Mitochondrial glutamyl-tRNA synthetase, encoded by
           a nuclear gene"
          Length = 536

 Score =  225 bits (574), Expect = 3e-63
 Identities = 132/353 (37%), Positives = 188/353 (53%), Gaps = 27/353 (7%)

Query: 68  KSSIIPNEIVEG-----KVRLRFAPSPTGFLHVGGCRTFLYNYILSKQMNGSLILRLEDT 122
           K S++  +I E       VR RFAPSPTGFLH+G  RT LYNY+L++  NG  +LRLEDT
Sbjct: 27  KKSLLSKKIKEDIHPSLPVRTRFAPSPTGFLHLGSLRTALYNYLLARNTNGQFLLRLEDT 86

Query: 123 DIKRNTKDSLDEIIKDLNWLNLTWDEGPDKVGEYGPYKQSEKIQLYKKIAHQFVNEGKAY 182
           D KR  + + + I + L W N+ +DE P         KQSE+  +Y K     ++ GKAY
Sbjct: 87  DQKRLIEGAEENIYEILKWCNINYDETP--------IKQSERKLIYDKYVKILLSSGKAY 138

Query: 183 FCFCSKEELQXXXXXXXXXXXXXXXN--RKCRDMNNEQIKMKLEQNIAYTIRFKSPXXXX 240
            CFCSKE L                +  R C  +  E+IK KL Q I +T+RFKSP    
Sbjct: 139 RCFCSKERLNDLRHSAMELKPPSMASYDRCCAHLGEEEIKSKLAQGIPFTVRFKSPERYP 198

Query: 241 XXXXXXXXXXXXXEVL-------EDFIILRSNELPTYNFSVSVDDYLMKITHVIRGVEHI 293
                          +       +D I+++S++LPTY+ +  VDD+LM ITHVIRG E +
Sbjct: 199 TFTDLLHGQINLQPQVNFNDKRYDDLILVKSDKLPTYHLANVVDDHLMGITHVIRGEEWL 258

Query: 294 SNTFKQILILETLNADIPHYAHIPVITTEEKKKISKRNNEYLIRNLREEGFKPECVVNYM 353
            +T K I +        P + HIP++TT   KK+SKR  +  I +L+ +G  PE ++N+ 
Sbjct: 259 PSTPKHIALYNAFGWACPKFIHIPLLTTVGDKKLSKRKGDMSISDLKRQGVLPEALINFC 318

Query: 354 TTLGWG-----SISKKEIYTMSELIDTFNIHKLNKSSVVFDIKKLKWMNKKYM 401
              GW      +  K E ++M EL   FN++ L K +   D KKL + NK ++
Sbjct: 319 ALFGWSPPRDLASKKHECFSMEELETIFNLNGLTKGNAKVDDKKLWFFNKHFL 371

 Score = 16.5 bits (31), Expect = 2.8
 Identities = 6/19 (31%), Positives = 12/19 (63%)

Query: 42  DKKYIYSFILNNNKRNTYN 60
           DK+Y    ++ ++K  TY+
Sbjct: 218 DKRYDDLILVKSDKLPTYH 236

 Score = 16.2 bits (30), Expect = 3.7
 Identities = 7/25 (28%), Positives = 15/25 (60%), Gaps = 2/25 (8%)

Query: 493 NTEYLEMKMIDD--FDSLIDDIVKS 515
           N  +L+ ++++      L+DDI+ S
Sbjct: 367 NKHFLQKRILNPSTLRELVDDIMPS 391

Lambda     K      H
   0.321    0.139    0.409 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 780
Number of extensions: 48
Number of successful extensions: 9
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 4
Length of query: 574
Length of database: 536
Length adjustment: 36
Effective length of query: 538
Effective length of database: 500
Effective search space:   269000
Effective search space used:   269000
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 27 (15.4 bits)
S2: 27 (15.0 bits)