Query= MAL13P1.294 Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding) GTP-binding
protein, putative
(381 letters)
>YAL036C RBG1 SGDID:S000000034, Chr I from 76153-75044, reverse
complement, Verified ORF, "Member of the DRG family of
GTP-binding proteins; interacts with translating
ribosomes"
Length = 369
Score = 338 bits (868), Expect = 1e-97
Identities = 183/380 (48%), Positives = 247/380 (65%), Gaps = 20/380 (5%)
Query: 4 LEKIKEIEAEMARTQKNKATEYHLGQLKAKLAKYRSQLLEAPKAGKKGE---GFDVQRQG 60
+EKIK IE EMARTQKNKAT +HLGQLKAKLAK R +LL + +G G GFDV R G
Sbjct: 5 VEKIKAIEDEMARTQKNKATSFHLGQLKAKLAKLRRELLTSASSGSGGGAGIGFDVARTG 64
Query: 61 DARICLIGFPSVGXXXXXXXXXXXXXEVADYEFTTLTCKPGIISYKDSKIQLLDLPGIIQ 120
A + +GFPSVG E A+YEFTTL PG+I YK +KIQ+LDLPGII
Sbjct: 65 VASVGFVGFPSVGKSTLLSKLTGTESEAAEYEFTTLVTVPGVIRYKGAKIQMLDLPGIID 124
Query: 121 GASEGRGRGRQVIAVAKSCDMIMMILDATRDDSQKIKLENELKSVGIRINQEPQRITLTR 180
GA +GRGRG+QVIAVA++C+++ +ILD + K +E EL+ VGIR+N+ P I + +
Sbjct: 125 GAKDGRGRGKQVIAVARTCNLLFIILDVNKPLHHKQIIEKELEGVGIRLNKTPPDILIKK 184
Query: 181 KKMGGVVINSTVPLTKLDNKLIMSILHQYKIHNCNLLFNEDASVDDLIDVIE-GNRKYIK 239
K+ GG+ I +TVPLT L N I +++ +Y+I++ + F DA+VDDLIDV+E +R+Y+
Sbjct: 185 KEKGGISITNTVPLTHLGNDEIRAVMSEYRINSAEIAFRCDATVDDLIDVLEASSRRYMP 244
Query: 240 CIYVYNKIDMLPIEDINKIALCDNTVVISSSKSWNLDVLKEYIFQKLEIIRVYTKVRKEK 299
IYV NKID L IE++ + N V ISS + WNLD L + ++ +L ++R+YTK + +
Sbjct: 245 AIYVLNKIDSLSIEELELLYRIPNAVPISSGQDWNLDELLQVMWDRLNLVRIYTKPKGQI 304
Query: 300 PDFTNPITLTRQRGTQTVEAVLNQIHKVNSQYFILLFYYQIDMIKDFKFALVWGRSTKHN 359
PDFT+P+ L R +V+ NQIHK ++ DF+ ALV+G S KH
Sbjct: 305 PDFTDPVVLRSDR--CSVKDFCNQIHK--------------SLVDDFRNALVYGSSVKHQ 348
Query: 360 PQRVDLHHKLADEDVIQIAK 379
PQ V L H L DEDV+ I K
Sbjct: 349 PQYVGLSHILEDEDVVTILK 368
Lambda K H
0.320 0.137 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 384
Number of extensions: 22
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 381
Length of database: 369
Length adjustment: 30
Effective length of query: 351
Effective length of database: 339
Effective search space: 118989
Effective search space used: 118989
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 24 (13.9 bits)
S2: 24 (13.9 bits)