Query= MAL13P1.341 Pf Annotation|Plasmodium_falciparum_Sanger|(protein coding) hypothetical protein, conserved (222 letters)
>YKL009W MRT4 SGDID:S000001492, Chr XI from 425885-426595, Verified
           ORF, "Protein involved in mRNA turnover and ribosome
           assembly, localizes to the nucleolus"
          Length = 236

 Score = 46.2 bits (108), Expect = 5e-10
 Identities = 47/189 (24%), Positives = 81/189 (42%), Gaps = 24/189 (12%)

Query: 42  YVYVL---DIRTYSNNNLKVAIEHFKPNGKFFIGKNKLMKLALGINENNEVKPNMSKISE 98
           YV+VL   D+RT     ++ +        K  +GK K+++ ALG     E K N+ ++S+
Sbjct: 39  YVWVLHLDDVRTPVLQEIRTSWA----GSKLIMGKRKVLQKALGEKREEEYKENLYQLSK 94

Query: 99  LLIGNRILLITKDGPLSVLKFFNEFQPEEYIKHGNISPQDITLKCGEVLN----VP---- 150
           L  G   LL T +   +V ++F  +   +Y +    +P   T+  G V +    +P    
Sbjct: 95  LCSGVTGLLFTDEDVNTVKEYFKSYVRSDYSRPNTKAPLTFTIPEGIVYSRGGQIPAEED 154

Query: 151 VSMQKDLQKRKLNFDIVDQKIILKENKVLAEKDKLISLENSK-------ILRMLNMKIAF 203
           V M   L+    N   +  KI  K  K+  +   L+  E  K       IL+   +  + 
Sbjct: 155 VPMIHSLEPTMRNKFEIPTKI--KAGKITIDSPYLVCTEGEKLDVRQALILKQFGIAASE 212

Query: 204 FDITVLGYW 212
           F + V  Y+
Sbjct: 213 FKVKVSAYY 221
Lambda     K      H
   0.320    0.139    0.391 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 126
Number of extensions: 7
Number of successful extensions: 6
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 222
Length of database: 236
Length adjustment: 23
Effective length of query: 199
Effective length of database: 213
Effective search space:    42387
Effective search space used:    42387
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 20 (12.1 bits)
S2: 20 (12.3 bits)