>FBgn0028694 type=protein;
           loc=2L:complement(5058515..5058676,5058786..5059550);
           ID=FBpp0078664; name=Rpn11-PA;
           parent=FBgn0028694,FBtr0079027;
           dbxref=FlyBase:FBpp0078664,
           FlyBase_Annotation_IDs:CG18174-PA,GB_protein:AAF52215.1,
           GB_protein:AAF52215;
           MD5=20993a30a8db7fb1dd94a870c167b0e1; release=r5.1;
           species=Dmel; length=308;
          Length = 308

 Score =  365 bits (938), Expect = e-106
 Identities = 171/286 (59%), Positives = 224/286 (78%)

Query: 26  LADTSEQVYISPLALLKILKHGRAGVPMEVMGLMLGEIVDEYTIRIVDVFAMPQSGNSVS 85
           + DT+EQVYIS LALLK+LKHGRAGVPMEVMGLMLGE VD+YT++++DVFAMPQ+G  VS
Sbjct: 22  VVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVQVIDVFAMPQTGTGVS 81

Query: 86  VEAVDPVYQTNMLEELKKTGRHEMVVGWYHSHPGFGCWLSGTDVNTQKSFEQLNPRTIGV 145
           VEAVDPV+Q  ML+ LK+TGR EMVVGWYHSHPGFGCWLSG D+NTQ+SFE L+ R + V
Sbjct: 82  VEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAV 141

Query: 146 VVDPIQSVKGKVVIDCFRLINPHILMLGQEPRQTTSNIGYLTKPTLTALVHGLNRNYYSI 205
           VVDPIQSVKGKVVID FRLINP++L+LGQEPRQTTSN+G+L KP++ AL+HGLNR+YYSI
Sbjct: 142 VVDPIQSVKGKVVIDAFRLINPNMLVLGQEPRQTTSNLGHLQKPSVQALIHGLNRHYYSI 201

Query: 206 VINYRXXXXXXXXXXXXHKDMWTNPLKLNDFHEQKKSSDETLEDIKKLTTLYNKNLRNEM 265
            INYR            HK  W + L L+D++E    +++T+ ++  L   YNK+L +E 
Sbjct: 202 SINYRKNELEQKMLLNLHKKSWKDGLTLSDYNEHCSINEDTVAEMLDLAKNYNKSLEDEE 261

Query: 266 KKTSEEILLENIGKIDAKKRIQNSVETLLNESILTCIGTMANTLFF 311
           K T E++ ++N+GK D K+ ++  V+ ++  +I+ C+G M +T+ F
Sbjct: 262 KMTPEQLAIKNVGKQDPKRHLEEKVDKVMQNNIVQCLGAMLDTIVF 307

Lambda     K      H
   0.317    0.134    0.390 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 290
Number of extensions: 6
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 311
Length of database: 308
Length adjustment: 27
Effective length of query: 284
Effective length of database: 281
Effective search space:    79804
Effective search space used:    79804
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 22 (13.0 bits)
S2: 22 (13.1 bits)