>YDR091C RLI1 SGDID:S000002498, Chr IV from 628530-626704, reverse
           complement, Verified ORF, "Essential iron-sulfur protein
           required for ribosome biogenesis and translation
           initiation; facilitates binding of a multifactor complex
           (MFC) of translation initiation factors to the small
           ribosomal subunit; predicted ABC family ATPase"
          Length = 608

 Score =  710 bits (1832), Expect = 0.0
 Identities = 355/605 (58%), Positives = 458/605 (75%), Gaps = 14/605 (2%)

Query: 21  RIAIVSSDKCKPKKCHLECKKNCPIVKTGKFCIEVDHASKIAYISETLCIGCGICVKKCP 80
           RIAIVS+DKCKPKKC  ECK++CP+VKTGK CIEV   SKIA+ISE LCIGCGICVKKCP
Sbjct: 7   RIAIVSADKCKPKKCRQECKRSCPVVKTGKLCIEVTPTSKIAFISEILCIGCGICVKKCP 66

Query: 81  FTSISIINLPKDINKDVVHRYGPNTFKLHRLPIPKLGQILGLVGTNGIGKSTALKILSSK 140
           F +I IINLP ++   V HRY  N+FKLHRLP P+ GQ+LGLVGTNGIGKSTALKIL+ K
Sbjct: 67  FDAIQIINLPTNLEAHVTHRYSANSFKLHRLPTPRPGQVLGLVGTNGIGKSTALKILAGK 126

Query: 141 LKPNLGKFNNPPEWRDILSFFRGNELQIFFTKLLEEKLSPIIKPQNVDLIPKQIKG---N 197
            KPNLG+F++PPEW++I+ +FRG+ELQ +FTK+LE+ +  IIKPQ VD IP+ IKG    
Sbjct: 127 QKPNLGRFDDPPEWQEIIKYFRGSELQNYFTKMLEDDIKAIIKPQYVDNIPRAIKGPVQK 186

Query: 198 ILEIINKKDKFNQKD--KYIAELDLEHLLDRNVEDLSGGELQRFALLMSIIGQSTNVYMF 255
           + E++  + + + +D  +YI  L LE++L R++E LSGGELQRFA+ MS + Q  +VYMF
Sbjct: 187 VGELLKLRMEKSPEDVKRYIKILQLENVLKRDIEKLSGGELQRFAIGMSCV-QEADVYMF 245

Query: 256 DEPSSYLDIKQRISMAKIIHKLVKHDNYIIVVEHDLSILDYLSDYVCCLWGKAGAYGVVT 315
           DEPSSYLD+KQR++ A+II  L+    Y+I VEHDLS+LDYLSD+VC ++G    YGVVT
Sbjct: 246 DEPSSYLDVKQRLNAAQIIRSLLAPTKYVICVEHDLSVLDYLSDFVCIIYGVPSVYGVVT 305

Query: 316 CPFSVREGINIFLDGFVPTDNLRIREESLNFKLATDQDATD--EDKKRLHFYNYPTMVKT 373
            P SVREGINIFLDG +P +NLR R E+L F++A   DAT+  ++      ++YP++ KT
Sbjct: 306 LPASVREGINIFLDGHIPAENLRFRTEALQFRIA---DATEDLQNDSASRAFSYPSLKKT 362

Query: 374 LNSFSLTIDKGHFSESEIFVLLGQNGSGKSTFIRLFAGLIKPDNXXXXXXXXXXXVSYKP 433
              F L +++G FS+SEI V++G+NG+GK+T I+L AG +KPD            VS KP
Sbjct: 363 QGDFVLNVEEGEFSDSEILVMMGENGTGKTTLIKLLAGALKPDE---GQDIPKLNVSMKP 419

Query: 434 QQIQAKFTGTVRQLLMSKLKGLYNDPYFNNEIIKPLKIESILDNQVLTLSGGELQKVAII 493
           Q+I  KF GTVRQL   K++G + +P F  +++KPL+I+ I+D +V  LSGGELQ+VAI+
Sbjct: 420 QKIAPKFPGTVRQLFFKKIRGQFLNPQFQTDVVKPLRIDDIIDQEVQHLSGGELQRVAIV 479

Query: 494 VTLAKNTNIYLIDEPSAYLDSEQRIIVSKIIKRFILNTNKTAFIVEHDFIMATYLADHVI 553
           + L    +IYLIDEPSAYLDSEQRII SK+I+RFIL+  KTAFIVEHDFIMATYLAD VI
Sbjct: 480 LALGIPADIYLIDEPSAYLDSEQRIICSKVIRRFILHNKKTAFIVEHDFIMATYLADKVI 539

Query: 554 VFDGQAGVNTVANTPQTLAAGMNKFLKIIDVTFRRDPSNYRPRINKYDSVKDKEQKLNGT 613
           VF+G    N  A  P++L  G N+FLK ++VTFRRDP+++RPRINK DS  DKEQK +G 
Sbjct: 540 VFEGIPSKNAHARAPESLLTGCNRFLKNLNVTFRRDPNSFRPRINKLDSQMDKEQKSSGN 599

Query: 614 YFIID 618
           YF +D
Sbjct: 600 YFFLD 604

Lambda     K      H
   0.320    0.139    0.404 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 1160
Number of extensions: 50
Number of successful extensions: 18
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 619
Length of database: 608
Length adjustment: 37
Effective length of query: 582
Effective length of database: 571
Effective search space:   332322
Effective search space used:   332322
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.8 bits)
S2: 28 (15.4 bits)