Query= MAL13P1.93 Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding) hypothetical
protein
(974 letters)
>YPR144C NOC4 SGDID:S000006348, Chr XVI from 821419-819761, reverse
complement, Verified ORF, "Nucleolar protein, forms a
complex with Nop14p that mediates maturation and nuclear
export of 40S ribosomal subunits"
Length = 552
Score = 37.7 bits (86), Expect = 2e-06
Identities = 20/94 (21%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Query: 682 NNMYTDYYKRLYELITPASFYYD-DTHFLKIIHLSIKNKMIPIYYILSFLKKLLRIGCLT 740
N Y ++Y +LY++I P + F +++ + + + + + + SF+KKL R+ +
Sbjct: 331 NLEYPNFYMKLYQIINPDLMHVKYRARFFRLMDVFLSSTHLSAHLVASFIKKLARLTLES 390
Query: 741 SYNISINILSVVYDILNYFKN---ELYEAMFISS 771
+ + ++ +Y+++ N L+ FIS+
Sbjct: 391 PPSAIVTVIPFIYNLIRKHPNCMIMLHNPAFISN 424
Score = 24.3 bits (51), Expect = 0.024
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
Query: 511 YTMILQLLHSIPVYVFPYTNNPYYLIDFFNISF-YKSPNL---YISLAALPGIFHIL 563
Y IL +LH + P+ + P L+DF S+ +S N + + AL G+F ++
Sbjct: 274 YKSILLILHK---RIIPHFHTPTKLMDFLTDSYNLQSSNKNAGVVPILALNGLFELM 327
Score = 20.0 bits (40), Expect = 0.45
Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
Query: 776 IMDFKKDSFCYDNLLENFDKDKIMGMLKMNSLF 808
+MDF DS+ NL + ++ +L +N LF
Sbjct: 295 LMDFLTDSY---NLQSSNKNAGVVPILALNGLF 324
Lambda K H
0.322 0.140 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 1016
Number of extensions: 50
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 3
Length of query: 974
Length of database: 552
Length adjustment: 40
Effective length of query: 934
Effective length of database: 512
Effective search space: 478208
Effective search space used: 478208
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 29 (16.3 bits)
S2: 29 (15.8 bits)