>YKR024C DBP7 SGDID:S000001732, Chr XI from 487015-484787, reverse
           complement, Verified ORF, "Putative ATP-dependent RNA
           helicase of the DEAD-box family involved in ribosomal
           biogenesis"
          Length = 742

 Score =  114 bits (286), Expect = 2e-29
 Identities = 74/184 (40%), Positives = 101/184 (54%), Gaps = 9/184 (4%)

Query: 180 LSESLINTLEKNEFIKM-TSIQKMSIPLFFK---PNDIFLKSMTGSGKTLCYAIPSIEKI 235
           +S  L++ LE+   IK  TSIQK +IP        ND F+ + TGSGKTL Y +P I  I
Sbjct: 150 VSSLLVSHLEQKMRIKKPTSIQKQAIPQIIGNAGKNDFFIHAQTGSGKTLSYLLPIISTI 209

Query: 236 LNMKEKVKITRDMGIFVLVLSPTRELAIQINNLFCILTKPYPYIVASCITGGEXXXXXXX 295
           LNM   V   R  G F LV++PTRELA QI ++   L     Y+V   + GGE       
Sbjct: 210 LNMDTHVD--RTSGAFALVIAPTRELASQIYHVCSTLVSCCHYLVPCLLIGGERKKSEKA 267

Query: 296 XXXXGISILTCTPGRLLDHLENTKSLKLTF---LKMVILDEADKIIYLGTQDKIKLIYDM 352
               G + +  TPGR+LDHL+NTK +K      L+ ++LDE DK++ LG  + I  I  +
Sbjct: 268 RLRKGCNFIIGTPGRVLDHLQNTKVIKEQLSQSLRYIVLDEGDKLMELGFDETISEIIKI 327

Query: 353 IRKI 356
           +  I
Sbjct: 328 VHDI 331

 Score = 87.4 bits (215), Expect = 3e-21
 Identities = 59/220 (26%), Positives = 101/220 (45%), Gaps = 28/220 (12%)

Query: 668 NVNIYILHGNLSKEDRLGNFMDFSKTNNS------ILLCTDIISRGIHFDSLSVVIQYDP 721
           +V IY LHG+LS++ R      F++ N +      I+ CTD+ SRG+    +  VI+ DP
Sbjct: 481 DVVIYKLHGSLSQQMRTSTLQHFARDNEATKGKHLIMFCTDVASRGLDLPHVGSVIELDP 540

Query: 722 PQILEEYIHKVGRTARLNKQGSAYLFLLKSQKQ----FXXXXXXXXXXXXXXXXXTIINH 777
           P  +E+++H+VGRTAR  ++G + LFLL  +++    +                  ++  
Sbjct: 541 PFAVEDHLHRVGRTARAGEKGESLLFLLPGEEEKYMDYIQPYHPMGWELLKFDKEILMPA 600

Query: 778 FK--------KFCIPNFLKSVGKDI----------LNFLHNHMQTIVKSNNTLMEKGTSA 819
           FK        KF   +   S  KD+              H +++  V  ++         
Sbjct: 601 FKDVNVNRNDKFIRKDEKSSKNKDVGDKEYEWDTNATTWHLNIERRVVGDSAFKNLAVKG 660

Query: 820 FLCTITSFYSTSKNLRSIFNAKDIHLGHLAYTFLLEKTPK 859
           F+  + ++ +     +  FN K +HLGHLA +F L + PK
Sbjct: 661 FISHVRAYATHISQEKKFFNVKFLHLGHLAKSFGLRERPK 700

 Score = 19.6 bits (39), Expect = 0.74
 Identities = 14/55 (25%), Positives = 25/55 (45%), Gaps = 9/55 (16%)

Query: 520 PEQLKQYCILIDMKQKFICLIYMLLDCIE---------KKKKPVVFLSNHHSVEY 565
           P+QL Q   ++  K + + L   L +  +         K  + +VF+S   SVE+
Sbjct: 387 PDQLLQRITIVPPKLRLVTLAATLNNITKDFIASGQQSKTLRTIVFVSCSDSVEF 441

 Score = 16.9 bits (32), Expect = 4.8
 Identities = 6/22 (27%), Positives = 11/22 (50%)

Query: 801 HMQTIVKSNNTLMEKGTSAFLC 822
           H + +   +  L+ KG + F C
Sbjct: 452 HHKNLTGDSVRLLTKGNTMFPC 473

 Score = 16.2 bits (30), Expect = 8.2
 Identities = 8/24 (33%), Positives = 13/24 (54%)

Query: 691 SKTNNSILLCTDIISRGIHFDSLS 714
           SKT  +I+  +   S   H+D+ S
Sbjct: 424 SKTLRTIVFVSCSDSVEFHYDAFS 447

Lambda     K      H
   0.319    0.136    0.391 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 1203
Number of extensions: 53
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7
Number of HSP's successfully gapped: 6
Length of query: 899
Length of database: 742
Length adjustment: 41
Effective length of query: 858
Effective length of database: 701
Effective search space:   601458
Effective search space used:   601458
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 30 (16.7 bits)
S2: 30 (16.2 bits)