Query= MAL7P1.28 Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding) hypothetical
protein
(1192 letters)
>YNL221C POP1 SGDID:S000005165, Chr XIV from 233696-231069, reverse
complement, Verified ORF, "Subunit of both RNase MRP,
which cleaves pre-rRNA, and nuclear RNase P, which
cleaves tRNA precursors to generate mature 5' ends;
binds to the RPR1 RNA subunit in Rnase P"
Length = 875
Score = 37.4 bits (85), Expect = 5e-06
Identities = 57/253 (22%), Positives = 103/253 (40%), Gaps = 50/253 (19%)
Query: 733 KKTIENYLKDYLEDNHRNKPKNYKQFESNIISSEL------------KKTKENIS----- 775
KK ++ K D+ + +NY Q E N + +EL + T + IS
Sbjct: 460 KKLNDSQRKTVNSDDILSLHENYPQDEINAVFNELCDPESRTQSYNNQNTLKEISARRYK 519
Query: 776 ------NNCKKYT---------KVPILIINKTNNKNQRYFIVCPAKKKCSTLFHLLIRNG 820
N+ K T +P++II + K + + +V P L+HLL R
Sbjct: 520 LLTATPNSINKTTVPFKESDDPSIPLVIIRRL--KTRDWIVVLPWFWLLP-LWHLLNRIP 576
Query: 821 SIA-IGLKEREKILKCCNFLTYPKDFPDTSGGISYNKL-REDISTNSYFQKPINKRVNY- 877
+ IGL++ ++I L +P D+P T G N +++ S + +KP+ KR+N+
Sbjct: 577 RMYHIGLRQFQQIQYENKQLYFPDDYPFTQLGYIENSFYKKEASKTKWDRKPMGKRINFE 636
Query: 878 ------------YCIGINNPFNYSWICIYPYNNHIKIIRQSDPYNQFMIKTFIQGFLTIS 925
Y I + F+ W + N I ++++D + M F
Sbjct: 637 KIKDIHNTKLPAYSGEIGDFFSSDWRFLQILRNGIDYLQRNDKTLELMDSKKTGQFNAQG 696
Query: 926 LKRISQINTFKDF 938
++ I+ +N +F
Sbjct: 697 VRDINCVNDVLEF 709
Score = 30.8 bits (68), Expect = 5e-04
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 161 KFIMRSKKKNWLETHTYHSKRFKMISIYGYKL 192
K+ R K WL TH +++KR M+ +GY++
Sbjct: 229 KYTKRQKHFAWLPTHIWNAKRSHMMKRWGYQM 260
Score = 28.5 bits (62), Expect = 0.003
Identities = 15/38 (39%), Positives = 21/38 (55%)
Query: 98 RCFQRIHKNRRRRCMSYNPYRVPLICKKTALDEMLISE 135
R FQ + + RRR S+N R+P + AL EM S+
Sbjct: 87 RIFQALPRKLRRRTASHNVRRIPKRMRNRALREMRKSD 124
Score = 23.9 bits (50), Expect = 0.062
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 1071 IIGYVSSGGHVLSKGYGYGVAHISFY 1096
+IG+++SG + L+ G G G+ I +
Sbjct: 820 LIGFITSGTYHLNCGNGMGIGFIDHH 845
Score = 18.9 bits (37), Expect = 2.0
Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Query: 435 LKDVIENFKNINSSVHIKHIKDMCMYELIGPKSFDLLINILKVKTKYVHQEKH 487
LK +I+ N ++ + + + M Y+ G L I K + KY ++KH
Sbjct: 188 LKRMIKESSTANPNIKLLNNR-MGSYDCTGVNE---LAPIPKGRVKYTKRQKH 236
Score = 18.5 bits (36), Expect = 2.6
Identities = 7/27 (25%), Positives = 14/27 (51%)
Query: 857 LREDISTNSYFQKPINKRVNYYCIGIN 883
++E + N + N+ +Y C G+N
Sbjct: 192 IKESSTANPNIKLLNNRMGSYDCTGVN 218
Score = 16.9 bits (32), Expect = 7.6
Identities = 5/15 (33%), Positives = 12/15 (80%)
Query: 497 VTIPYDFVIPLYTVL 511
V +P+ +++PL+ +L
Sbjct: 558 VVLPWFWLLPLWHLL 572
Lambda K H
0.322 0.138 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 1841
Number of extensions: 80
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7
Number of HSP's successfully gapped: 7
Length of query: 1192
Length of database: 875
Length adjustment: 45
Effective length of query: 1147
Effective length of database: 830
Effective search space: 952010
Effective search space used: 952010
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 31 (17.2 bits)
S2: 31 (16.5 bits)