>YMR146C TIF34 SGDID:S000004754, Chr XIII from 558523-557480,
           reverse complement, Verified ORF, "Subunit of the core
           complex of translation initiation factor 3(eIF3), which
           is essential for translation"
          Length = 347

 Score =  185 bits (469), Expect = 2e-51
 Identities = 110/343 (32%), Positives = 180/343 (52%), Gaps = 27/343 (7%)

Query: 1   MKRKYLSGHNRPLTHVNTNYDGDLLFTTGRDKKFILWRVSDGTQIGLYEC-SGAVYNSDV 59
           MK   L+GH RPLT V  N +GDLLF+  +D    +W   +G ++G  +  +G +++ DV
Sbjct: 1   MKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDV 60

Query: 60  TYDSKRIVCSSAANKVYLFDVYTGEPLKIIEENGPVRFVEFNKDPLNQDKIVVAHDRLKS 119
              +K  V  SA   + L+DV  G+ +   +   PV+ VEF+  P     + +  + +K+
Sbjct: 61  DCFTKYCVTGSADYSIKLWDVSNGQCVATWKSPVPVKRVEFS--PCGNYFLAILDNVMKN 118

Query: 120 DHKRSIKLYDLKSDNLIWKQDHESR--------------CIQVRWCFFDKLILSAHENGE 165
               SI +Y+++ D+   +    S                    W    K I++ H++G+
Sbjct: 119 PG--SINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGK 176

Query: 166 IVVWNAEDGH-LIRKFQAHSKEVTNLSFDKDRMLMLSSSLDGTAKLRDGVNFEIINEYKT 224
           I  ++  + +  +     H K ++++ F  D    ++SS D  + L D    +++ +Y+T
Sbjct: 177 ISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYET 236

Query: 225 DRPLNTCDISPLFKNENNPKNHIILAGGQAAEHVTTTASGEGKFQTLLYDIIHSNELGSI 284
           D PLNT  I+PL       K  IIL GGQ A+ VTTT++ EGKF+   Y  I   E+G +
Sbjct: 237 DCPLNTAVITPL-------KEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRV 289

Query: 285 KGHFGPVHSIKFLPHGDGFVSGGEDGFARIYHFDNDYFIGKYD 327
           +GHFGP++++   P G  + SGGEDGF R++HF+  YF  KYD
Sbjct: 290 QGHFGPLNTVAISPQGTSYASGGEDGFIRLHHFEKSYFDFKYD 332

Lambda     K      H
   0.319    0.138    0.422 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 424
Number of extensions: 32
Number of successful extensions: 16
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 327
Length of database: 347
Length adjustment: 28
Effective length of query: 299
Effective length of database: 319
Effective search space:    95381
Effective search space used:    95381
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 23 (13.5 bits)
S2: 23 (13.5 bits)