>YJL074C SMC3 SGDID:S000003610, Chr X from 302766-299074, reverse
           complement, Verified ORF, "Subunit of the multiprotein
           cohesin complex required for sister chromatid cohesion
           in mitotic cells; also required, with Rec8p, for
           cohesion and recombination during meiosis;
           phylogenetically conserved SMC chromosomal ATPase family
           member"
          Length = 1230

 Score = 38.1 bits (87), Expect = 6e-06
 Identities = 44/223 (19%), Positives = 89/223 (39%), Gaps = 34/223 (15%)

Query: 532 LDELRNVKDLKKEDFKSFILKYNELSSPNSNYQEMLEQNANNEQFLKEIGTDVTNNENNQ 591
           L+  +N K + +E   + ILK  +L++  +  QE L  N      L+E  ++++  E  +
Sbjct: 747 LNTKKNEKLILEESLNAIILKLEKLNTNRTFAQEKL--NTFENDLLQEFDSELSKEEKER 804

Query: 592 FNVDFLRKKNKELKNEIQIFRDNLYTPMXXXXXXXXXXXKQCTNQTFDNHYMNNDKCHND 651
             ++ L K+     N++ I  D L                   N   ++  +  +   ND
Sbjct: 805 --LESLTKEISAAHNKLNITSDAL---------EGITTTIDSLNAELESKLIPQE---ND 850

Query: 652 QDQNEYSISERYIYDQQDKYNT---DEESINKMKEKLKYYDSLNIDNDMHNIEANEQNQS 708
            +     + + +I+  QD+      ++ES+ K  E     +   +  ++ ++ A E N  
Sbjct: 851 LESKMSEVGDAFIFGLQDELKELQLEKESVEKQHENA-VLELGTVQREIESLIAEETNNK 909

Query: 709 SLLYLKKNIHKIRRDVLEECNQNSHSEDRKRKNFQRQIEKDLL 751
            LL              E+ N       +K  NFQ+ +EK ++
Sbjct: 910 KLL--------------EKANNQQRLLLKKLDNFQKSVEKTMI 938

 Score = 24.6 bits (52), Expect = 0.074
 Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 8/74 (10%)

Query: 1149 LNTFINEENVQEHCVKSPEQVRQKTNTPNKKVANLKKSELNENNDMQNYDMFENNVKELF 1208
            LNT  NE+ + E  + +     +K NT N+  A  K +   EN+ +Q +D       EL 
Sbjct: 747  LNTKKNEKLILEESLNAIILKLEKLNT-NRTFAQEKLNTF-ENDLLQEFD------SELS 798

Query: 1209 YEDKKKKNEFVKDI 1222
             E+K++     K+I
Sbjct: 799  KEEKERLESLTKEI 812

 Score = 21.6 bits (44), Expect = 0.63
 Identities = 13/35 (37%), Positives = 17/35 (48%)

Query: 1188 LNENNDMQNYDMFENNVKELFYEDKKKKNEFVKDI 1222
            L   NDM        NV +  +E+ KK NE  KD+
Sbjct: 978  LQRLNDMNTEISGLKNVNKRAFENFKKFNERRKDL 1012

 Score = 21.6 bits (44), Expect = 0.63
 Identities = 11/37 (29%), Positives = 18/37 (48%)

Query: 529  NKQLDELRNVKDLKKEDFKSFILKYNELSSPNSNYQE 565
            N ++  L+NV     E+FK F  +  +L+   S   E
Sbjct: 985  NTEISGLKNVNKRAFENFKKFNERRKDLAERASELDE 1021

 Score = 20.8 bits (42), Expect = 1.1
 Identities = 15/68 (22%), Positives = 30/68 (44%), Gaps = 10/68 (14%)

Query: 1338 MVEHNQNYQDNNHIDSF------EKSYVKNEDDEMKAYRNASYEVSQIFSYYKRKRKMIN 1391
            ++ H +N   N+H +S       E +  +N  D    Y   S  VS    +  ++ + ++
Sbjct: 1067 LIIHRKNDNANDHDESIDVDMDAESNESQNGKDSEIMYTGVSISVS----FNSKQNEQLH 1122

Query: 1392 MEELKDVQ 1399
            +E+L   Q
Sbjct: 1123 VEQLSGGQ 1130

 Score = 20.4 bits (41), Expect = 1.4
 Identities = 27/118 (22%), Positives = 49/118 (41%), Gaps = 15/118 (12%)

Query: 1297 LLKMKKKSNNDRMTPVKDPTNGNVL--KINKMIKVEEQKKQEAMVEHNQNYQDNNHIDSF 1354
            +LK++K + N      K  T  N L  + +  +  EE+++ E++ +      +  +I S 
Sbjct: 765  ILKLEKLNTNRTFAQEKLNTFENDLLQEFDSELSKEEKERLESLTKEISAAHNKLNITSD 824

Query: 1355 EKSYVKNEDDEMKAYRNASYEVSQIFSYYKRKRKMINM---------EELKDVQPEKE 1403
                +    D +    NA  E   I      + KM  +         +ELK++Q EKE
Sbjct: 825  ALEGITTTIDSL----NAELESKLIPQENDLESKMSEVGDAFIFGLQDELKELQLEKE 878

 Score = 20.0 bits (40), Expect = 1.8
 Identities = 10/49 (20%), Positives = 27/49 (55%), Gaps = 3/49 (6%)

Query: 531 QLDELRNVKDLKKEDFKSFILKYNELSSPNSNYQEMLEQNANNEQFLKE 579
           +L EL+  K+  ++  ++ +L   EL +     + ++ +  NN++ L++
Sbjct: 869 ELKELQLEKESVEKQHENAVL---ELGTVQREIESLIAEETNNKKLLEK 914

 Score = 19.6 bits (39), Expect = 2.4
 Identities = 9/36 (25%), Positives = 19/36 (52%)

Query: 435 LNNRKKKKIEINDYIKNLKIRKIDILNNRIEVSVYD 470
           +   ++KKI+IN  +  L  +  ++   R E+  Y+
Sbjct: 186 MEETEQKKIQINKEMGELNSKLSEMEQERKELEKYN 221

 Score = 18.9 bits (37), Expect = 4.1
 Identities = 11/39 (28%), Positives = 18/39 (46%)

Query: 1322 KINKMIKVEEQKKQEAMVEHNQNYQDNNHIDSFEKSYVK 1360
            +I  +I  E   K+     +NQ       +D+F+KS  K
Sbjct: 897  EIESLIAEETNNKKLLEKANNQQRLLLKKLDNFQKSVEK 935

Lambda     K      H
   0.313    0.132    0.373 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4586
Number of extensions: 249
Number of successful extensions: 9
Number of sequences better than 10.0: 1
Number of HSP's gapped: 9
Number of HSP's successfully gapped: 9
Length of query: 1687
Length of database: 1230
Length adjustment: 50
Effective length of query: 1637
Effective length of database: 1180
Effective search space:  1931660
Effective search space used:  1931660
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 34 (18.3 bits)
S2: 34 (17.7 bits)