>YDL031W DBP10 SGDID:S000002189, Chr IV from 394214-397201, Verified
           ORF, "Putative ATP-dependent RNA helicase of the
           DEAD-box protein family, constituent of 66S
           pre-ribosomal particles; essential protein involved in
           ribosome biogenesis"
          Length = 995

 Score =  128 bits (322), Expect = 2e-33
 Identities = 72/222 (32%), Positives = 126/222 (56%), Gaps = 3/222 (1%)

Query: 161 FQQLGLSENMCRSIASNLKYNKPTNIQKLCITKILHRRDVICISKTGSGKSLVYLCTLID 220
           F   GLS+ +  +I     + +PT IQ+  I  IL  RD++ +++TGSGK+  ++  +++
Sbjct: 139 FPSFGLSKIVLNNIKRK-GFRQPTPIQRKTIPLILQSRDIVGMARTGSGKTAAFILPMVE 197

Query: 221 ILKEHNKYYGIRGLIILPTKELVIQIYKLCKKICKNYFHLXXXXXXXXXXXXKQFDILNQ 280
            LK H+   G R +I+ P++EL +Q + + K   +    L            +QF ++  
Sbjct: 198 KLKSHSGKIGARAVILSPSRELAMQTFNVFKDFARG-TELRSVLLTGGDSLEEQFGMMMT 256

Query: 281 NLDILLCTPGRLSFLLQETKLSLEKVEILIIDEADRLLELNYYNDMNVIYKSLNNTSKQT 340
           N D+++ TPGR   L  E  L L+ VE ++ DEADRL E+ +   +N +  SL  T++QT
Sbjct: 257 NPDVIIATPGRFLHLKVEMNLDLKSVEYVVFDEADRLFEMGFQEQLNELLASL-PTTRQT 315

Query: 341 ILVSATLPTNVENYFKLKLNNPDVLFLTSDNTINEKVHLHFL 382
           +L SATLP ++ ++ K  L NP ++ L ++  ++E + + FL
Sbjct: 316 LLFSATLPNSLVDFVKAGLVNPVLVRLDAETKVSENLEMLFL 357

 Score = 77.4 bits (189), Expect = 6e-18
 Identities = 39/108 (36%), Positives = 62/108 (57%), Gaps = 1/108 (0%)

Query: 414 TKYHILFFSNILKHFKIHHSILYGNSDTSFRFEQINNFTKNEHIQFLLVTDVASRGINIT 473
           T++H+ + S +L+      S +YG  D   R  Q+ NF        L+VTDVA+RG++I 
Sbjct: 441 TRHHVEYISQLLRDCGYLISYIYGTLDQHARKRQLYNFRAGL-TSILVVTDVAARGVDIP 499

Query: 474 SVQNVINYNLPFSPKLFIHRIGRACRTDISGYGISLLTYQDILYAYEI 521
            + NVINY LP S K+F+HR+GR  R    G+  S++   ++ Y  ++
Sbjct: 500 MLANVINYTLPGSSKIFVHRVGRTARAGNKGWAYSIVAENELPYLLDL 547

 Score = 30.4 bits (67), Expect = 8e-04
 Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 2/48 (4%)

Query: 1037 MRYNNTSTLDIKNPGFDLPPDETEELNKQRFVKKQIWDKKKRKFVLTE 1084
            ++  N    D     +DL  D+  +++KQ    K  WDKK++K+V T+
Sbjct: 804  LQITNGFANDAAQAAYDLNSDDKVQVHKQTATVK--WDKKRKKYVNTQ 849

 Score = 20.4 bits (41), Expect = 0.85
 Identities = 15/47 (31%), Positives = 18/47 (38%), Gaps = 12/47 (25%)

Query: 1039 YNNTSTLDIKNPGFDLPPDETEELNKQRFV-----KKQIWDKKKRKF 1080
            YNN        PG       TE++ K R +      K     KKRKF
Sbjct: 956  YNNA-------PGLRSELKSTEQIRKDRIIAEKKRAKNARPSKKRKF 995

 Score = 19.2 bits (38), Expect = 1.9
 Identities = 9/35 (25%), Positives = 18/35 (51%)

Query: 838 SDDQENDTTEIQNNEHYEESNIENVNANYDYSKNK 872
           SDD+ N + + Q  +  ++ N      N + +K+K
Sbjct: 101 SDDENNASGKTQTGDDEDDVNEYFSTNNLEKTKHK 135

 Score = 18.9 bits (37), Expect = 2.5
 Identities = 8/21 (38%), Positives = 13/21 (61%)

Query: 1057 DETEELNKQRFVKKQIWDKKK 1077
            DE +   K+R  KK+ + K+K
Sbjct: 402  DENDRQKKRRNFKKEKFRKQK 422

 Score = 18.1 bits (35), Expect = 4.2
 Identities = 6/16 (37%), Positives = 10/16 (62%)

Query: 832 VQNEIKSDDQENDTTE 847
           + NEI  +D E+D  +
Sbjct: 28  IANEIALNDSESDAND 43

Lambda     K      H
   0.317    0.135    0.395 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 2348
Number of extensions: 102
Number of successful extensions: 12
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7
Number of HSP's successfully gapped: 7
Length of query: 1289
Length of database: 995
Length adjustment: 46
Effective length of query: 1243
Effective length of database: 949
Effective search space:  1179607
Effective search space used:  1179607
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 32 (17.5 bits)
S2: 32 (16.9 bits)