Query= PF07_0011 Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding) hypothetical
protein, conserved
(180 letters)
>YHR122W YHR122W SGDID:S000001164, Chr VIII from 353628-354323,
Uncharacterized ORF, "Protein required for cell
viability"
Length = 231
Score = 103 bits (258), Expect = 2e-27
Identities = 53/128 (41%), Positives = 81/128 (63%), Gaps = 5/128 (3%)
Query: 49 EEDKINVDEIFDLLRDIKDPEYSYTLEALKIIEKKNIHIN-----YEEKLITVYFTPTIP 103
E D I+ EI+DL+ I DPE+ +L L ++ ++I ++ E + + TPTI
Sbjct: 100 EPDLIDAQEIYDLIAHISDPEHPLSLGQLSVVNLEDIDVHDSGNQNEMAEVVIKITPTIT 159
Query: 104 NCSLATLIGLMISIKLQYSLCNNYKTNIYIYPGSHNSEHSINKQLNDKERIAAAIENKHL 163
+CSLATLIGL I ++L+ SL ++ I + G+H+SE+ +NKQLNDKER+AAA EN+ L
Sbjct: 160 HCSLATLIGLGIRVRLERSLPPRFRITILLKKGTHDSENQVNKQLNDKERVAAACENEQL 219
Query: 164 FNVIKNSI 171
V+ +
Sbjct: 220 LGVVSKML 227
Lambda K H
0.317 0.137 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 116
Number of extensions: 4
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 180
Length of database: 231
Length adjustment: 21
Effective length of query: 159
Effective length of database: 210
Effective search space: 33390
Effective search space used: 33390
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 19 (11.6 bits)
S2: 19 (11.9 bits)