Query= PF07_0012 Pf Annotation|Plasmodium_falciparum_Sanger|(protein coding) hypothetical protein (1540 letters)
>YAR003W SWD1 SGDID:S000000064, Chr I from 155007-156287, Verified
            ORF, "Subunit of the COMPASS (Set1C) complex, which
            methylates histone H3 on lysine 4 and is required in
            transcriptional silencing near telomeres; WD40 beta
            propeller superfamily member with similarity to mammalian
            Rbbp7"
          Length = 426

 Score = 48.5 bits (114), Expect = 1e-09
 Identities = 44/169 (26%), Positives = 73/169 (43%), Gaps = 9/169 (5%)

Query: 1221 NNVNMLDSNYNVDTIINNKSDHKDKRRRYMFSSIDEIRSYH-TIHNPIQKEINEL---CC 1276
            +N+  L  + N + +  N SD     R+Y  S  DE  +   T+ +  Q  IN+L   C 
Sbjct: 215  SNIKHLIVSQNGERLAINCSDRTI--RQYEISIDDENSAVELTLEHKYQDVINKLQWNCI 272

Query: 1277 FSDDIYQSYLLVITLRSGVHTLYIYNLKNIDLQNAVKVNISAYKGFKQIKWTKCYDMLIS 1336
               +    YL+  T  S  H LYI+   +  L   V+V   A +    I W      ++S
Sbjct: 273  LFSNNTAEYLVASTHGSSAHELYIWETTSGTL---VRVLEGAEEELIDINWDFYSMSIVS 329

Query: 1337 LSNVGNNILVLKNKHLNNWSFFISDFELIDSNIEVIEDDNEFDIIENIQ 1385
                  N+ V        WS    DFE ++ N++ +E ++EFD ++  +
Sbjct: 330  NGFESGNVYVWSVVIPPKWSALAPDFEEVEENVDYLEKEDEFDEVDEAE 378

 Score = 19.6 bits (39), Expect = 0.71
 Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 4/33 (12%)

Query: 681 ISIDQMNGIIQDNVKEKYLHV----KKNTVLYS 709
           ISID  N  ++  ++ KY  V    + N +L+S
Sbjct: 243 ISIDDENSAVELTLEHKYQDVINKLQWNCILFS 275

 Score = 19.2 bits (38), Expect = 0.93
 Identities = 8/28 (28%), Positives = 16/28 (57%)

Query: 505 ETYKKDSFNMMEGKEKSHLDIFKNYYNL 532
           ET       ++EG E+  +DI  ++Y++
Sbjct: 298 ETTSGTLVRVLEGAEEELIDINWDFYSM 325

 Score = 18.9 bits (37), Expect = 1.2
 Identities = 6/10 (60%), Positives = 8/10 (80%)

Query: 1261 HTIHNPIQKE 1270
            HTI NP++ E
Sbjct: 21   HTIENPLRTE 30

 Score = 18.9 bits (37), Expect = 1.2
 Identities = 7/15 (46%), Positives = 8/15 (53%)

Query: 615 CNINSFEEKTIYIID 629
           C    FEE   Y+ID
Sbjct: 130 CVATIFEESDAYVID 144

 Score = 16.9 bits (32), Expect = 4.6
 Identities = 5/11 (45%), Positives = 9/11 (81%)

Query: 892 QKENDASEIDE 902
           +KE++  E+DE
Sbjct: 366 EKEDEFDEVDE 376

 Score = 16.5 bits (31), Expect = 6.0
 Identities = 4/15 (26%), Positives = 9/15 (60%)

Query: 618 NSFEEKTIYIIDMIL 632
           N FE   +Y+  +++
Sbjct: 330 NGFESGNVYVWSVVI 344

 Score = 16.2 bits (30), Expect = 7.9
 Identities = 6/14 (42%), Positives = 8/14 (57%)

Query: 1477 FVNIKEHVESYMNT 1490
            F  +KEH E   +T
Sbjct: 9    FAVLKEHPEKLTHT 22
Lambda     K      H
   0.318    0.136    0.403 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 1327
Number of extensions: 73
Number of successful extensions: 9
Number of sequences better than 10.0: 1
Number of HSP's gapped: 8
Number of HSP's successfully gapped: 8
Length of query: 1540
Length of database: 426
Length adjustment: 41
Effective length of query: 1499
Effective length of database: 385
Effective search space:   577115
Effective search space used:   577115
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 30 (16.6 bits)
S2: 30 (16.2 bits)