Query= PF07_0043 Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding) 60S ribosomal
protein L34-a, putative
(150 letters)
>YER056C-A RPL34A SGDID:S000002135, Chr V from
270183-270147,269749-269421, reverse complement,
Verified ORF, "Protein component of the large (60S)
ribosomal subunit, nearly identical to Rpl34Bp and has
similarity to rat L34 ribosomal protein"
Length = 121
Score = 126 bits (317), Expect = 1e-34
Identities = 59/105 (56%), Positives = 78/105 (74%)
Query: 1 MAQRVHYRRHNHYNTKSNKVRPVRTPGGKLTIHVVKKKAGKPKCADCKTAIQGVKALRPA 60
MAQRV +RR N YNT+SNK++ V+TPGG L VKK A +PKC DC +A+QG+ LRP
Sbjct: 1 MAQRVTFRRRNPYNTRSNKIKVVKTPGGILRAQHVKKLATRPKCGDCGSALQGISTLRPR 60
Query: 61 DNYRARRKNRTVARAYGGSICARCIRERIMRAFLFEEQKCVRQVL 105
+ ++TV+RAYGGS CA C++ERI+RAFL EEQK V++V+
Sbjct: 61 QYATVSKTHKTVSRAYGGSRCANCVKERIIRAFLIEEQKIVKKVV 105
Lambda K H
0.326 0.135 0.416
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 82
Number of extensions: 4
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 150
Length of database: 121
Length adjustment: 15
Effective length of query: 135
Effective length of database: 106
Effective search space: 14310
Effective search space used: 14310
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 16 (10.4 bits)
S2: 16 (10.8 bits)