Query= PF07_0067 Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding) hypothetical
protein
(1069 letters)
>YGR245C SDA1 SGDID:S000003477, Chr VII from 982073-979770, reverse
complement, Verified ORF, "Highly conserved nuclear
protein required for actin cytoskeleton organization and
passage through Start, plays a critical role in G1
events, binds Nap1p, also involved in 60S ribosome
biogenesis"
Length = 767
Score = 60.5 bits (145), Expect = 5e-13
Identities = 44/200 (22%), Positives = 90/200 (45%), Gaps = 4/200 (2%)
Query: 494 YVNYTFIDFLFDPYTYSSNIFNLICSKYQFNNGTI--KLLLLNILCRIYQRNKIIEENFF 551
Y+N++ I L DP ++ +F S N + K+ L+ +L R+ +K+I +
Sbjct: 327 YLNFSAIHLLRDPQGFAEKLFKEHLSGKTKNKFDMEQKISLMQLLSRLIGTHKLIVLGIY 386
Query: 552 LYYENVLLHLKNKNTISRYLSIFIQCLHDYIPTPFIQRIVCVLIKKFLCEHLSEEFVYLX 611
++ L + ++R +S Q HD +P I +V + +F+ + ++ E
Sbjct: 387 TFFLKYL--TPKQRDVTRIMSACAQACHDLVPPEVINVMVRKIADEFVSDGVANEVAAAG 444
Query: 612 XXXXXXXXXKFPNCLNEEIFEAVIVFKDYKNKQISTIIRRFINICKHVNPQVLHKKFLDK 671
+ P ++E + + ++ +K K K ++ + I + + V P++L KK K
Sbjct: 445 INTIREICSRAPLAIDEILLQDLVEYKGSKAKGVNMAAKSLIALYRDVAPEMLKKKDRGK 504
Query: 672 QTAILVQKKKILNKSGESVQ 691
A+ VQ+ K K + Q
Sbjct: 505 NAAMEVQEAKKGGKDSKRPQ 524
Score = 25.0 bits (53), Expect = 0.022
Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 7/74 (9%)
Query: 870 KRKNNEIETNDNNKDNTL-------LHLNXXXXXXXXXXXXXXXXLDIVDKNKKILCERI 922
K + ++E +D+ KDN L L+ +D ++I RI
Sbjct: 582 KEYDVDMEDSDDEKDNAKGKESDSDLELSDDDDEKEVKDEQEDADIDPEAAFREIASTRI 641
Query: 923 LTDEDFKKLKKMRD 936
LT DF KL+++R+
Sbjct: 642 LTPADFAKLQELRN 655
Score = 22.7 bits (47), Expect = 0.11
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 95 DNKNMFTSEYDFEFSDIETDDDLKSENNKSD 125
DN S+ D E SD + + ++K E +D
Sbjct: 596 DNAKGKESDSDLELSDDDDEKEVKDEQEDAD 626
Score = 22.3 bits (46), Expect = 0.14
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 12/49 (24%)
Query: 103 EYDFEFSDIETDDDLK---------SENNKSDDFNDIEKKDMLNDAKVE 142
EYD D+E DD K S+ SDD ++ E KD DA ++
Sbjct: 583 EYDV---DMEDSDDEKDNAKGKESDSDLELSDDDDEKEVKDEQEDADID 628
Score = 18.5 bits (36), Expect = 2.0
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 42 SVVLLNPFKKNDLLCSQLNFLSFTCHYFS 70
+++LL K D Q FL HY S
Sbjct: 13 NIILLQNLVKRDPESYQEEFLQQYAHYES 41
Score = 17.7 bits (34), Expect = 3.5
Identities = 6/13 (46%), Positives = 9/13 (69%)
Query: 445 KSKIKQLHIKKEK 457
K K+ + HI K+K
Sbjct: 751 KQKVLRAHITKQK 763
Score = 16.9 bits (32), Expect = 5.9
Identities = 6/9 (66%), Positives = 7/9 (77%)
Query: 468 SSSDDEKEL 476
S DDEKE+
Sbjct: 610 SDDDDEKEV 618
Lambda K H
0.322 0.139 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 1122
Number of extensions: 50
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7
Number of HSP's successfully gapped: 7
Length of query: 1069
Length of database: 767
Length adjustment: 43
Effective length of query: 1026
Effective length of database: 724
Effective search space: 742824
Effective search space used: 742824
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 31 (17.2 bits)
S2: 31 (16.5 bits)