Query= PF07_0077 Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding) hypothetical
protein
(1032 letters)
>YFL039C ACT1 SGDID:S000001855, Chr VI from 54695-54686,54377-53260,
reverse complement, Verified ORF, "Actin, structural
protein involved in cell polarization, endocytosis, and
other cytoskeletal functions"
Length = 375
Score = 60.5 bits (145), Expect = 2e-13
Identities = 36/121 (29%), Positives = 58/121 (47%), Gaps = 1/121 (0%)
Query: 900 VINLTNERIGIPEILFNPQDINLEHCSIVELVYRCISLLPKHIQKYFVSQIYISGGSTKF 959
VI + NER PE LF+P + LE I + Y I ++K I +SGG+T F
Sbjct: 247 VITIGNERFRAPEALFHPSVLGLESAGIDQTTYNSIMKCDVDVRKELYGNIVMSGGTTMF 306
Query: 960 RNFKHRLYKELRQVFPSDWDINIYSHKNSLYSNYIGTYVWLSDPSIYNYNVITREQYFNF 1019
R+ KE+ + PS + I + YS +IG + L+ + + I++++Y
Sbjct: 307 PGIAERMQKEITALAPSSMKVKIIAPPERKYSVWIGGSI-LASLTTFQQMWISKQEYDES 365
Query: 1020 G 1020
G
Sbjct: 366 G 366
Score = 41.2 bits (95), Expect = 1e-07
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Query: 476 LYIDVGFSHTYVLPYIEYKLIEYAVLRTKISGSILNSYLKSTLS---YKHVNLEHNELLV 532
+ +D G T+V+P + +A+LR ++G L YL LS Y E +V
Sbjct: 151 IVLDSGDGVTHVVPIYAGFSLPHAILRIDLAGRDLTDYLMKILSERGYSFSTTAERE-IV 209
Query: 533 ENIKERACYVSLDY 546
+IKE+ CYV+LD+
Sbjct: 210 RDIKEKLCYVALDF 223
Score = 40.0 bits (92), Expect = 3e-07
Identities = 38/161 (23%), Positives = 69/161 (42%), Gaps = 23/161 (14%)
Query: 8 DIPKLILDNGAGLIKGGILPSYSQIEGSLCEEIEPKFILPNCVGQIRKKNIF-------- 59
++ L++DNG+G+ K G + P+ + P+ VG+ R + I
Sbjct: 4 EVAALVIDNGSGMCKAG-----------FAGDDAPRAVFPSIVGRPRHQGIMVGMGQKDS 52
Query: 60 HISDSCQSICEYFCHR-PHVDGLLLDLELETKIWEKIFSCRNTVGGKINEMGLCVTESYL 118
++ D QS R P G++ + + KIW F N + E + +TE+ +
Sbjct: 53 YVGDEAQSKRGILTLRYPIEHGIVTNWDDMEKIWHHTF--YNELRVAPEEHPVLLTEAPM 110
Query: 119 TPAYIKQGVIELLFEYFNMNQIVIVSSQTMLPFSYIGLNLG 159
P ++ + +++FE FN+ VS Q +L G G
Sbjct: 111 NPKSNREKMTQIMFETFNV-PAFYVSIQAVLSLYSSGRTTG 150
Lambda K H
0.316 0.135 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 621
Number of extensions: 24
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 3
Length of query: 1032
Length of database: 375
Length adjustment: 37
Effective length of query: 995
Effective length of database: 338
Effective search space: 336310
Effective search space used: 336310
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.7 bits)
S2: 28 (15.4 bits)