Query= PF07_0079 Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding) 60S ribosomal
protein L11a, putative
(173 letters)
>FBgn0013325 type=protein;
loc=2R:join(15329989..15329994,15330123..15330245,
15330306..15330603,15330818..15330945); ID=FBpp0085717;
name=RpL11-PA; parent=FBgn0013325,FBtr0086533;
dbxref=FlyBase:FBpp0085717,
FlyBase_Annotation_IDs:CG7726-PA,GB_protein:AAF57560.1,
GB_protein:AAF57560;
MD5=682ca7a32dc65d4c4fb73f03ce0cdc71; release=r5.1;
species=Dmel; length=184;
Length = 184
Score = 226 bits (575), Expect = 2e-64
Identities = 111/167 (66%), Positives = 129/167 (77%)
Query: 6 QNVMREIKVNKLVLNICVGESGDRLTRAARVLEQLTEQKPIFGKCRFTIRSFGVRRNEKI 65
+N MR++ + KL LNICVGESGDRLTRAA+VLEQLT Q+P+F K R+T+RSFG+RRNEKI
Sbjct: 14 KNPMRDLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI 73
Query: 66 SCFVTVRGKKALEILEKGLKVKEYELRRKNFSDTGNFGFGIQEHIDLGIKYDPSTGIYGM 125
+ TVRG KA EILE+GLKV+EYELRR+NFS TGNFGFGIQEHIDLGIKYDPS GIYG+
Sbjct: 74 AVHCTVRGAKAEEILERGLKVREYELRRENFSSTGNFGFGIQEHIDLGIKYDPSIGIYGL 133
Query: 126 DFYVHLXXXXXXXXXXXXXXXXXXXXXXVTKEDAMKWFQTKFDGILL 172
DFYV L +TKEDAMKWFQ K+DGI+L
Sbjct: 134 DFYVVLGRPGYNVNHRKRKSGTVGFQHRLTKEDAMKWFQQKYDGIIL 180
Lambda K H
0.323 0.141 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 159
Number of extensions: 4
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 173
Length of database: 184
Length adjustment: 19
Effective length of query: 154
Effective length of database: 165
Effective search space: 25410
Effective search space used: 25410
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 18 (11.2 bits)
S2: 18 (11.5 bits)