Query= PF07_0088 Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding) 40S ribosomal
protein S5, putative
(195 letters)
>FBgn0038277 type=protein;
loc=3R:complement(10726249..10726416,
10726675..10727199); ID=FBpp0082465; name=RpS5b-PA;
parent=FBgn0038277,FBtr0083006;
dbxref=FlyBase:FBpp0082465,
FlyBase_Annotation_IDs:CG7014-PA,GB_protein:AAF55116.1,
GB_protein:AAF55116;
MD5=cb483975a84cfa53b58648ab80ce652e; release=r5.1;
species=Dmel; length=230;
Length = 230
Score = 272 bits (696), Expect = 3e-78
Identities = 136/193 (70%), Positives = 161/193 (83%)
Query: 3 TTTADIKLFKKWSYEEINIADLSLVDCIAVSQKACVYTPHTAGRYQKKRFRKALCPIVER 62
T +IKLF +W+ ++I+I+D+SL D IAV +K Y PH+AGRY KRFRKA CPIVER
Sbjct: 38 TEWPEIKLFGRWACDDISISDISLQDYIAVKEKFARYLPHSAGRYAAKRFRKAQCPIVER 97
Query: 63 LVNSMMMHGRNNGKKLKAIRIVAYAFEIIHLMTGENPLQVFVNAVQKGGPREDSTRIGSA 122
L + +MM GR+NGKKL A RIV +AFEIIHL+T ENPLQV VNA+ GPREDSTRIG A
Sbjct: 98 LTSGLMMKGRSNGKKLLACRIVKHAFEIIHLLTSENPLQVTVNAIVNSGPREDSTRIGRA 157
Query: 123 GVVRRQAVDVSPLRRVNQAIYLICTGARNAAFRNIKSISECLAEEIINCANESSSSYAIK 182
G VRRQAVDVSPLRRVNQAI+LICTGAR AAFRNIK+++ECLA+E+IN A SS+SYAIK
Sbjct: 158 GTVRRQAVDVSPLRRVNQAIWLICTGAREAAFRNIKTVAECLADELINAAKGSSNSYAIK 217
Query: 183 KKDEIERVAKANR 195
KKDE+ERVAK+NR
Sbjct: 218 KKDELERVAKSNR 230
Lambda K H
0.320 0.132 0.377
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 182
Number of extensions: 3
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 195
Length of database: 230
Length adjustment: 21
Effective length of query: 174
Effective length of database: 209
Effective search space: 36366
Effective search space used: 36366
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 19 (11.7 bits)
S2: 19 (11.9 bits)