Query= PF07_0098 Pf Annotation|Plasmodium_falciparum_Sanger|(protein coding) dynactin 4, putative (226 letters)
>YDL055C PSA1 SGDID:S000002213, Chr IV from 356759-355674, reverse
           complement, Verified ORF, "GDP-mannose pyrophosphorylase
           (mannose-1-phosphate guanyltransferase), synthesizes
           GDP-mannose from GTP and mannose-1-phosphate in cell
           wall biosynthesis; required for normal cell wall
           structure"
          Length = 361

 Score = 32.0 bits (71), Expect = 2e-05
 Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 6/53 (11%)

Query: 136 IGNNCIIKATYIGNNVYIGN------NTIIGERVIIKDNVIIKQNTVIPNDTI 182
           I N+ ++K+T +G N  +G        T++G+ V +KD + I    V+P+ +I
Sbjct: 298 IKNHSLVKSTIVGWNSTVGQWCRLEGVTVLGDDVEVKDEIYINGGKVLPHKSI 350

 Score = 31.2 bits (69), Expect = 3e-05
 Identities = 17/47 (36%), Positives = 24/47 (51%)

Query: 136 IGNNCIIKATYIGNNVYIGNNTIIGERVIIKDNVIIKQNTVIPNDTI 182
           +GN  I     I +   IG + +IG  V I D V I ++ V+ N TI
Sbjct: 252 VGNALIDPTAKISSTAKIGPDVVIGPNVTIGDGVRITRSVVLCNSTI 298

 Score = 26.9 bits (58), Expect = 5e-04
 Identities = 17/64 (26%), Positives = 29/64 (45%)

Query: 113 NKMENHKPDASSYITITIGNYVYIGNNCIIKATYIGNNVYIGNNTIIGERVIIKDNVIIK 172
           N +   +P   +     +GN +      I     IG +V IG N  IG+ V I  +V++ 
Sbjct: 235 NSLAKRQPKKLATGANIVGNALIDPTAKISSTAKIGPDVVIGPNVTIGDGVRITRSVVLC 294

Query: 173 QNTV 176
            +T+
Sbjct: 295 NSTI 298

 Score = 15.0 bits (27), Expect = 2.0
 Identities = 5/24 (20%), Positives = 12/24 (50%)

Query: 128 ITIGNYVYIGNNCIIKATYIGNNV 151
           + + + +YI    ++    I +NV
Sbjct: 331 VEVKDEIYINGGKVLPHKSISDNV 354
Lambda     K      H
   0.320    0.141    0.421 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 218
Number of extensions: 17
Number of successful extensions: 6
Number of sequences better than 10.0: 1
Number of HSP's gapped: 6
Number of HSP's successfully gapped: 4
Length of query: 226
Length of database: 361
Length adjustment: 26
Effective length of query: 200
Effective length of database: 335
Effective search space:    67000
Effective search space used:    67000
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 22 (13.0 bits)
S2: 22 (13.1 bits)