>YMR028W TAP42 SGDID:S000004630, Chr XIII from 327481-328581,
           Verified ORF, "Essential protein involved in the TOR
           signaling pathway; physically associates with the
           protein phosphatase 2A and the SIT4 protein phosphatase
           catalytic subunits"
          Length = 366

 Score = 36.6 bits (83), Expect = 1e-06
 Identities = 43/176 (24%), Positives = 76/176 (43%), Gaps = 28/176 (15%)

Query: 86  LFSKNEEIEDINTKYIKLLLIPFILGNLCYE--------TLNINIRYERLKDAILYYNEF 137
           LFS NE I+D++T  IK L + + LG L               +++   LK ++  +  F
Sbjct: 55  LFSTNETIDDVSTASIKFLAVDYYLGLLISRRQSNDSDVAQRQSMKLIYLKKSVESFINF 114

Query: 138 LRLINMFKIIVIDDYLYEEEGTQTNLMYRRNIKI-------KRAKDEHKFELMYNDIFQK 190
           L L+  +K+  +D  + E+ G   N   R N ++       K  KD    +L   +  + 
Sbjct: 115 LTLLQDYKL--LDPLVGEKLG---NFKDRYNPQLSELYAQPKNNKDLSGAQLKRKEKIEL 169

Query: 191 FNHQYNKR---KIKDVQQNISNNTXXXXXXXXXXXXRKMYISLIQHKCMQTLNTID 243
           F  Q NK    K+  ++  + NN             R++Y+  + H  + T+N I+
Sbjct: 170 F--QRNKEISTKLHCLELELKNN---DEDHDHDELLRELYLMRLHHFSLDTINNIE 220

 Score = 28.9 bits (63), Expect = 3e-04
 Identities = 10/16 (62%), Positives = 13/16 (81%)

Query: 406 REWDDWKDLHPKGIGN 421
           REWD++K+ H KG GN
Sbjct: 346 REWDEFKESHAKGSGN 361

 Score = 17.3 bits (33), Expect = 0.81
 Identities = 6/11 (54%), Positives = 9/11 (81%)

Query: 83  KSDLFSKNEEI 93
           K +LF +N+EI
Sbjct: 166 KIELFQRNKEI 176

 Score = 16.9 bits (32), Expect = 1.1
 Identities = 6/14 (42%), Positives = 11/14 (78%)

Query: 69  ELLYAFKTMGSYIN 82
           +L+Y  K++ S+IN
Sbjct: 100 KLIYLKKSVESFIN 113

Lambda     K      H
   0.319    0.138    0.400 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 357
Number of extensions: 19
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7
Number of HSP's successfully gapped: 7
Length of query: 427
Length of database: 366
Length adjustment: 31
Effective length of query: 396
Effective length of database: 335
Effective search space:   132660
Effective search space used:   132660
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 24 (13.9 bits)
S2: 24 (13.9 bits)