Query= PF07_0105 Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding) exonuclease
i, putative
(1347 letters)
>FBgn0015553 type=protein;
loc=2L:complement(18679705..18681099,
18681155..18681958); ID=FBpp0080675; name=tos-PA;
parent=FBgn0015553,FBtr0081131;
dbxref=GB_protein:AAF53687.1,FlyBase:FBpp0080675,
FlyBase_Annotation_IDs:CG10387-PA,GB_protein:AAF53687;
MD5=396bf5591fcce1421600c6fce9a351bc; release=r5.1;
species=Dmel; length=732;
Length = 732
Score = 117 bits (294), Expect = 3e-30
Identities = 58/196 (29%), Positives = 110/196 (56%), Gaps = 8/196 (4%)
Query: 1 MGISNLLQFLKPIIKNSHISKYKNEVVGVDIMCWIHRGLISCAYDIVTDQYNDSYLNFIE 60
MGI+ L+ F+ H+ + V VD CW+H+G+ CA + + D Y+ +
Sbjct: 1 MGITGLIPFVGKASSQLHLKDIRGSTVAVDTYCWLHKGVFGCAEKLARGEDTDVYIQYCL 60
Query: 61 KMLVPIYNHNIKVVFVFDGEELPEKKKENMIRKNRREKAKMELQEI--ISKVKNPRTNEM 118
K + + +++IK + VFDG+ LP K R++ R+++K E+ + +++ R++
Sbjct: 61 KYVNMLLSYDIKPILVFDGQHLPAKALTEKRRRDSRKQSKERAAELLRLGRIEEARSH-- 118
Query: 119 VLKKCIQAISVSKEIIDSVKEFCRKKNIDYIISPYEADAQLSYLCRMGFISCAISEDSDL 178
+++C + V+ ++ + CR +N+D I++PYEADAQ+++L R I+EDSDL
Sbjct: 119 -MRRC---VDVTHDMALRLIRECRSRNVDCIVAPYEADAQMAWLNRADVAQYIITEDSDL 174
Query: 179 LVYGCPRVLYKLKNTG 194
++G +++KL G
Sbjct: 175 TLFGAKNIIFKLDLNG 190
Score = 35.4 bits (80), Expect = 2e-05
Identities = 25/91 (27%), Positives = 44/91 (48%), Gaps = 5/91 (5%)
Query: 333 FNIDMFLTMCVLSGCDYSNDFHITGMGIKTAYNLIFQHKNIENIFHFLISNDRWRNKIPE 392
++ D F MC+LSGCDY + + G+G+ A I + + E++ L + N
Sbjct: 211 YHFDKFRRMCILSGCDYLDS--LPGIGLAKACKFILKTEQ-EDMRIALKKIPSYLNM--R 265
Query: 393 NLNTFDKLMNTFQKIKNAFLNHQVYDFILRK 423
NL D + F K + F + +Y+ + R+
Sbjct: 266 NLEVDDDYIENFMKAEATFRHMFIYNPLERR 296
Score = 21.6 bits (44), Expect = 0.29
Identities = 26/136 (19%), Positives = 53/136 (38%), Gaps = 8/136 (5%)
Query: 772 IMETYNDHYINKTYDEHSNNKVNINICDDITTTN---NDHNEEMLDEKKEFAQIKSAKNI 828
+ +T ND + HS +K +C DI N + ++ D + + +A ++
Sbjct: 534 LRDTENDDMDEQKLSSHSGHKKLRLVCKDIPGKNPIRQRCSSQISDGETD--TDTTASSL 591
Query: 829 YENMKKNFFLFKTLNEDMNTPIKSLNVKGKMNMQDNCEQDDKVGNLKSDKMTEQNEKCDN 888
E+ K ED+N + +G N + K +L + E ++ D
Sbjct: 592 LESQDKGVPSPLESQEDLNNSQPQIPTEGNTN---STTIRIKSLDLLLENSPEPTQESDR 648
Query: 889 ISNEKCDNILNDKCDN 904
+N+ + +D C +
Sbjct: 649 NNNDAIILLSDDSCSS 664
Score = 21.2 bits (43), Expect = 0.38
Identities = 26/105 (24%), Positives = 47/105 (44%), Gaps = 22/105 (20%)
Query: 655 KNKTIENCNERINKRKTD-DCISSFNLKKKVKTTSAHTSS----SNSQ--------DNLT 701
KN + C+ +I+ +TD D +S L+ + K + S +NSQ N T
Sbjct: 566 KNPIRQRCSSQISDGETDTDTTASSLLESQDKGVPSPLESQEDLNNSQPQIPTEGNTNST 625
Query: 702 IQHIEALDCNNQNV---------NDNEEKKNIYENSCNYDETFNS 737
I++LD +N N+N+ + ++SC+ D+ +S
Sbjct: 626 TIRIKSLDLLLENSPEPTQESDRNNNDAIILLSDDSCSSDQRASS 670
Score = 20.4 bits (41), Expect = 0.65
Identities = 11/51 (21%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Query: 669 RKTDDCISSFNLKKKVKTTSAHTSSSNSQDNLTIQHIEALDCNNQNVNDNE 719
+K D S K++V+ S ++ + Q L +H+ D N ++++ +
Sbjct: 498 KKVDSLKRSIFAKEQVQIRSRFFATQDEQTRLQREHLR--DTENDDMDEQK 546
Score = 19.2 bits (38), Expect = 1.4
Identities = 6/21 (28%), Positives = 9/21 (42%)
Query: 863 DNCEQDDKVGNLKSDKMTEQN 883
D+C D + + S QN
Sbjct: 660 DSCSSDQRASSTSSSSQQRQN 680
Score = 18.5 bits (36), Expect = 2.5
Identities = 8/14 (57%), Positives = 11/14 (78%)
Query: 833 KKNFFLFKTLNEDM 846
KK F+ KTLNE++
Sbjct: 389 KKVDFVGKTLNEEI 402
Score = 18.1 bits (35), Expect = 3.2
Identities = 7/27 (25%), Positives = 16/27 (59%)
Query: 1278 KHITVLKSTEKLQNQSIEKNKETSQKI 1304
+H+ TEK + S +++KE + ++
Sbjct: 80 QHLPAKALTEKRRRDSRKQSKERAAEL 106
Score = 17.3 bits (33), Expect = 5.5
Identities = 7/20 (35%), Positives = 9/20 (45%)
Query: 490 DTHNKGGDDNIKINHDTHNK 509
DT N D+ +H H K
Sbjct: 536 DTENDDMDEQKLSSHSGHKK 555
Score = 17.3 bits (33), Expect = 5.5
Identities = 7/20 (35%), Positives = 9/20 (45%)
Query: 505 DTHNKGGDDNFKINHDTHNK 524
DT N D+ +H H K
Sbjct: 536 DTENDDMDEQKLSSHSGHKK 555
Score = 17.3 bits (33), Expect = 5.5
Identities = 7/20 (35%), Positives = 9/20 (45%)
Query: 520 DTHNKGGDDNFKINHDTHNK 539
DT N D+ +H H K
Sbjct: 536 DTENDDMDEQKLSSHSGHKK 555
Score = 16.5 bits (31), Expect = 9.3
Identities = 7/26 (26%), Positives = 14/26 (53%)
Query: 826 KNIYENMKKNFFLFKTLNEDMNTPIK 851
KN+ + K+ + +E+ +TP K
Sbjct: 355 KNVKRSKHKSIWQTNFQSENTHTPKK 380
Lambda K H
0.314 0.131 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 2100
Number of extensions: 115
Number of successful extensions: 14
Number of sequences better than 10.0: 1
Number of HSP's gapped: 12
Number of HSP's successfully gapped: 12
Length of query: 1347
Length of database: 732
Length adjustment: 44
Effective length of query: 1303
Effective length of database: 688
Effective search space: 896464
Effective search space used: 896464
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 31 (17.0 bits)
S2: 31 (16.5 bits)