Query= PF07_0113 Pf Annotation|Plasmodium_falciparum_Sanger|(protein coding) hypothetical protein (707 letters)
>YJL036W SNX4 SGDID:S000003573, Chr X from 378742-380013, Verified
           ORF, "Sorting nexin, involved in the retrieval of
           late-Golgi SNAREs from the post-Golgi endosome to the
           trans-Golgi network and in cytoplasm to vacuole
           transport; contains a PX domain; forms complex with
           Snx41p and Atg20p"
          Length = 423

 Score = 37.4 bits (85), Expect = 1e-06
 Identities = 32/151 (21%), Positives = 71/151 (47%), Gaps = 18/151 (11%)

Query: 432 NYERIEFFFKHYFKNIKDLKDFFNTINEKENRNTKDIVNFDMDGNTIIKKTNVLEN---- 487
           N + +   F + FK +    + F  I EK ++  + +   D   + ++KK + +      
Sbjct: 169 NKDEVTDAFMNAFKTVHKQNEEFTEIREKSDKLDRTVTKIDKLFHKVVKKNDSMSEDYTK 228

Query: 488 -GINIEMIKKII-----YTSPRLSLINKNT--IIKRLKHYKNELGYDY----KELQHILY 535
            G N++ +++++       + +L + N+    +   L+     L Y+Y    K+L+H + 
Sbjct: 229 LGSNLQELQELVTGENEELAAKLKIFNEGVTQLSYGLQDLTKYLDYEYIVDLKDLEHYID 288

Query: 536 NIPQFFAFGNLKK-KYKELL-YIHETIKEKD 564
           ++ Q     + K+  Y+EL  Y+  +IKEK+
Sbjct: 289 SMRQLIKLKDQKQIDYEELSDYLTRSIKEKN 319

 Score = 22.7 bits (47), Expect = 0.038
 Identities = 21/83 (25%), Positives = 44/83 (53%), Gaps = 10/83 (12%)

Query: 341 QNHRNTYTNIMLQPVK--VNYVFVNNEKG--KKNEHIKNDQEENQKIDVEEKITQEDKEK 396
           ++HR    +  LQP K  V   F+N  K   K+NE     +E++ K+D    +T+ DK  
Sbjct: 156 ESHRKVLQD-SLQPNKDEVTDAFMNAFKTVHKQNEEFTEIREKSDKLD--RTVTKIDK-- 210

Query: 397 NIEPNKLESHNNLLKDYEEINTS 419
            +    ++ ++++ +DY ++ ++
Sbjct: 211 -LFHKVVKKNDSMSEDYTKLGSN 232

 Score = 19.6 bits (39), Expect = 0.32
 Identities = 15/61 (24%), Positives = 25/61 (40%), Gaps = 20/61 (32%)

Query: 376 DQEENQKIDVEEKITQEDKEKNIEPNKLESHNNLLKDYEEINTSACVEGKFNYFLNNYER 435
           DQ++    ++ + +T+  KEK          NNL+  Y          G  N+F N  E 
Sbjct: 298 DQKQIDYEELSDYLTRSIKEK----------NNLISGY----------GGSNFFANKLEE 337

Query: 436 I 436
           +
Sbjct: 338 L 338

 Score = 18.5 bits (36), Expect = 0.72
 Identities = 8/33 (24%), Positives = 18/33 (54%), Gaps = 2/33 (6%)

Query: 548 KKYKELLYIHETIKEKDLQKLIKMYP--RIFTY 578
           ++Y +LL +H+ +  +    +I   P  ++F Y
Sbjct: 77  RRYSDLLLLHDILLNRFPTCIIPPLPDKKVFQY 109

 Score = 17.3 bits (33), Expect = 1.6
 Identities = 7/13 (53%), Positives = 8/13 (61%)

Query: 35 TKWNNRSSIKNKG 47
          TK NN S   N+G
Sbjct: 55 TKTNNTSFYDNRG 67

 Score = 16.2 bits (30), Expect = 3.6
 Identities = 5/10 (50%), Positives = 8/10 (80%)

Query: 264 NFFLNVIQKL 273
           NFF N +++L
Sbjct: 329 NFFANKLEEL 338

 Score = 15.8 bits (29), Expect = 4.6
 Identities = 7/25 (28%), Positives = 14/25 (56%)

Query: 241 LKSLENYAVGYKENLLAMLQKEKNF 265
           LK LE+Y    ++ +    QK+ ++
Sbjct: 280 LKDLEHYIDSMRQLIKLKDQKQIDY 304

 Score = 15.8 bits (29), Expect = 4.6
 Identities = 8/36 (22%), Positives = 17/36 (47%)

Query: 380 NQKIDVEEKITQEDKEKNIEPNKLESHNNLLKDYEE 415
           NQ+    EKI + + +      +LE+   +   +E+
Sbjct: 342 NQEASRREKINKLEGKITSLTGELENAKKVADGFEQ 377
Lambda     K      H
   0.323    0.140    0.416 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 713
Number of extensions: 44
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 9
Number of HSP's successfully gapped: 8
Length of query: 707
Length of database: 423
Length adjustment: 35
Effective length of query: 672
Effective length of database: 388
Effective search space:   260736
Effective search space used:   260736
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 27 (15.4 bits)
S2: 27 (15.0 bits)