>YOL077C BRX1 SGDID:S000005437, Chr XV from 186723-185848, reverse
           complement, Verified ORF, "Nucleolar protein,
           constituent of 66S pre-ribosomal particles; depletion
           leads to defects in rRNA processing and a block in the
           assembly of large ribosomal subunits; possesses a
           sigma(70)-like RNA-binding motif"
          Length = 291

 Score =  145 bits (366), Expect = 2e-39
 Identities = 85/224 (37%), Positives = 127/224 (56%), Gaps = 7/224 (3%)

Query: 162 NRQRVLIVRSPLKKKGCKSFIDNLKLLLPHHKMENKWDKKVPKSELNDISYSRNCNNIIF 221
           N+QR L++ S       +  I +L  LLPH + E K D K    +LN+I+   NCNN++F
Sbjct: 29  NKQRTLLISSRGVNYRHRHLIQDLSGLLPHSRKEPKLDTKKDLQQLNEIAELYNCNNVLF 88

Query: 222 FDVKRKR-YCLWICKSITGPSLYFEILDYIPLHSLLFSGNCLLYSRPLLIFSKHFDELDH 280
           F+ ++ +   LW+ K   GP++ F I +   +  L F+GNCL  SRP+L F + F+   H
Sbjct: 89  FEARKHQDLYLWLSKPPNGPTIKFYIQNLHTMDELNFTGNCLKGSRPVLSFDQRFESSPH 148

Query: 281 LKLIKEMFIHVFGVPNYHPLSKPFYDHCYNFFYVNDLIYFRHYQILPVTLADSNNVNKQQ 340
            +LIKE+ +H F VP     SKPF DH  +F  V+D I+ R Y+I   T       + ++
Sbjct: 149 YQLIKELLVHNFCVPPNARKSKPFIDHVMSFSIVDDKIWVRTYEISHSTKNKEEYEDGEE 208

Query: 341 ---LVEIGPQFTLHIIKIFEECFKGRILYENEKYQNYVTPQQVK 381
              LVEIGP+F + +I I E  F G  +YEN++   YV+P  V+
Sbjct: 209 DISLVEIGPRFVMTVILILEGSFGGPKIYENKQ---YVSPNVVR 249

Lambda     K      H
   0.322    0.141    0.433 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 272
Number of extensions: 9
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 416
Length of database: 291
Length adjustment: 29
Effective length of query: 387
Effective length of database: 262
Effective search space:   101394
Effective search space used:   101394
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 23 (13.5 bits)
S2: 23 (13.5 bits)