Query= PF08_0026 Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding) hypothetical
protein
(630 letters)
>YNL308C KRI1 SGDID:S000005252, Chr XIV from 55896-54121, reverse
complement, Verified ORF, "Essential nucleolar protein
required for 40S ribosome biogenesis; physically and
functionally interacts with Krr1p"
Length = 591
Score = 40.4 bits (93), Expect = 2e-07
Identities = 18/53 (33%), Positives = 30/53 (56%)
Query: 577 DDMPIRFKYIKVKPRSFKLSTDYILNTDDSTLNKVVPLKKVLPYYENKKKLVD 629
++ ++F+Y +V P SF L+ I DD+ LN+ + LKK PY + + D
Sbjct: 474 EEQDLKFRYREVSPESFGLTAREIFAADDTDLNEFIGLKKFAPYRSKELRAKD 526
Score = 37.0 bits (84), Expect = 2e-06
Identities = 41/156 (26%), Positives = 59/156 (37%), Gaps = 33/156 (21%)
Query: 240 TYLDEQEELKKQIQEACKIA--DEQNDNIF---DDNFFTIXXXXXXXXXXXXXXXXTFLK 294
+++ +Q E K Q+ K A DE+N+ DD F K
Sbjct: 156 SFVSQQREEKTQLLNEIKSAFSDEENEESSGDEDDGFLK-------------------KK 196
Query: 295 TSNMMKEENNLLKEYWKDNLSKDEEFLRDYILKEMW---REDKVQNXXXXXXXXXXXXXX 351
+ KE NL D +E FL +++ ++ W + DKV +
Sbjct: 197 EPSTKKEGKNL-----PDPTVNEENFLEEFVNQQAWIPKKGDKVISLDLNNNEEDDEEFE 251
Query: 352 KA-ENFERTYNFRYEEQNGNMINSIPRKIESSVRQD 386
A E FE YNFRYE+ N I S R + R D
Sbjct: 252 DAAEKFENAYNFRYEDPNAAEIISYARSQATLRRSD 287
Score = 17.3 bits (33), Expect = 2.0
Identities = 9/33 (27%), Positives = 18/33 (54%)
Query: 305 LLKEYWKDNLSKDEEFLRDYILKEMWREDKVQN 337
L KEY + + + + D +LK ++E++ N
Sbjct: 331 LTKEYGAEINADMVKKITDTLLKNDFKEEEWDN 363
Score = 16.2 bits (30), Expect = 4.5
Identities = 8/31 (25%), Positives = 14/31 (45%)
Query: 357 ERTYNFRYEEQNGNMINSIPRKIESSVRQDI 387
E+ FRY E + R+I ++ D+
Sbjct: 475 EQDLKFRYREVSPESFGLTAREIFAADDTDL 505
Lambda K H
0.315 0.135 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 831
Number of extensions: 44
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 4
Length of query: 630
Length of database: 591
Length adjustment: 37
Effective length of query: 593
Effective length of database: 554
Effective search space: 328522
Effective search space used: 328522
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 27 (15.2 bits)
S2: 27 (15.0 bits)