Query= PF08_0039 Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding) ribosomal
protein, putative
(139 letters)
>FBgn0015288 type=protein;
loc=X:complement(656758..657024,658335..658955,
659117..659128); ID=FBpp0070143; name=RpL22-PA;
parent=FBgn0015288,FBtr0070148;
dbxref=FlyBase:FBpp0070143,
FlyBase_Annotation_IDs:CG7434-PA,GB_protein:AAF45546.1,
GB_protein:AAF45546;
MD5=a26dc5dfcb32ff692f0397cf729fb53a; release=r5.1;
species=Dmel; length=299;
Length = 299
Score = 75.9 bits (185), Expect = 5e-19
Identities = 31/105 (29%), Positives = 62/105 (59%)
Query: 35 KSTKGIKYVLDCTKPVKDTILDISGLEQFFKDKIXXXXXXXXXXXXXXXTSDEYKIYITV 94
K +++ +DCT +D+I+D++ E++ K ++ + K+ ++
Sbjct: 186 KKKVSLRFTIDCTNIAEDSIMDVADFEKYIKARLKVNGKVNNLGNNVTFERSKLKLIVSS 245
Query: 95 HIPFSKRYIKYLAKKYIKMHQIRDFLRVIAKGKLAYEFKYFQLNN 139
+ FSK Y+KYL KKY+K + +RD++RV+A K +YE +YF++++
Sbjct: 246 DVHFSKAYLKYLTKKYLKKNSLRDWIRVVANEKDSYELRYFRISS 290
Lambda K H
0.325 0.141 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 99
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 139
Length of database: 299
Length adjustment: 21
Effective length of query: 118
Effective length of database: 278
Effective search space: 32804
Effective search space used: 32804
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 19 (11.7 bits)
S2: 19 (11.9 bits)