Query= PF08_0039 Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding) ribosomal
protein, putative
(139 letters)
>YLR061W RPL22A SGDID:S000004051, Chr XII from
263195-263206,263596-263949, Verified ORF, "Protein
component of the large (60S) ribosomal subunit, has
similarity to Rpl22Bp and to rat L22 ribosomal protein"
Length = 121
Score = 50.1 bits (118), Expect = 1e-11
Identities = 23/96 (23%), Positives = 46/96 (47%)
Query: 42 YVLDCTKPVKDTILDISGLEQFFKDKIXXXXXXXXXXXXXXXTSDEYKIYITVHIPFSKR 101
+ +D + P ++ + D + ++ D I T D + + FS +
Sbjct: 15 FTVDVSSPTENGVFDPASYAKYLIDHIKVEGAVGNLGNAVTVTEDGTVVTVVSTAKFSGK 74
Query: 102 YIKYLAKKYIKMHQIRDFLRVIAKGKLAYEFKYFQL 137
Y+KYL KKY+K +Q+RD++R ++ Y ++Q+
Sbjct: 75 YLKYLTKKYLKKNQLRDWIRFVSTKTNEYRLAFYQV 110
Lambda K H
0.325 0.141 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 60
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 139
Length of database: 121
Length adjustment: 14
Effective length of query: 125
Effective length of database: 107
Effective search space: 13375
Effective search space used: 13375
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 15 ( 9.9 bits)
S2: 15 (10.4 bits)