>YHR066W SSF1 SGDID:S000001108, Chr VIII from 229337-230698,
           Verified ORF, "Constituent of 66S pre-ribosomal
           particles, required for ribosomal large subunit
           maturation; functionally redundant with Ssf2p; member of
           the Brix family"
          Length = 453

 Score = 37.4 bits (85), Expect = 7e-07
 Identities = 31/151 (20%), Positives = 63/151 (41%), Gaps = 14/151 (9%)

Query: 125 SLTFSVQSYTTSTLIKSLYLKNVYCNFNKL--KPLLILKNFNNTSNTEMSNYLIITQNIL 182
           ++TF V  Y+    IK    +    N + +   PLL+L  F+ +  +   +  +  + ++
Sbjct: 106 TVTFQVLDYSLGRDIKKFLKRPKSLNNDDVLNPPLLVLNGFSTSKRSGEDDQDVNVEKVI 165

Query: 183 ----KNLYPSVNLNEDFMNKPRRVLLYCYNDNDQTIYFRQYATNLKKISFKKILKEAYNE 238
               +N++P +N     +N  +RV +   +     I  R Y  +++++   + LK  Y  
Sbjct: 166 VSMFQNIFPPLNPARTSLNSIKRVFMINKDRETGEISMRHYFIDIREVEISRNLKRLYKA 225

Query: 239 DMSGYNDVFNYLSSKLDGKHFNTDTISQMLE 269
                    N LS  +   H   D  S +L+
Sbjct: 226 K--------NNLSKTVPNLHRKEDISSLILD 248

 Score = 21.6 bits (44), Expect = 0.037
 Identities = 7/18 (38%), Positives = 14/18 (77%)

Query: 266 QMLEIGPRVSYKIFKITD 283
           ++ E+GPR++ K+ KI +
Sbjct: 327 KLTELGPRLTLKLVKIEE 344

 Score = 17.3 bits (33), Expect = 0.71
 Identities = 7/18 (38%), Positives = 11/18 (61%)

Query: 39  ENEESLIKKTNIMVIKKK 56
           E EE++ KK  +   KK+
Sbjct: 384 EQEENIAKKKAVKDAKKQ 401

Lambda     K      H
   0.319    0.135    0.380 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 234
Number of extensions: 13
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 3
Length of query: 303
Length of database: 453
Length adjustment: 30
Effective length of query: 273
Effective length of database: 423
Effective search space:   115479
Effective search space used:   115479
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 24 (13.9 bits)
S2: 24 (13.9 bits)