Query= PF08_0071 Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding) Fe-superoxide
dismutase
(198 letters)
>YHR008C SOD2 SGDID:S000001050, Chr VIII from 123585-122884, reverse
complement, Verified ORF, "Manganese-containing
superoxide dismutase; protects cells against oxygen
toxicity"
Length = 233
Score = 125 bits (313), Expect = 8e-34
Identities = 77/205 (37%), Positives = 109/205 (53%), Gaps = 25/205 (12%)
Query: 3 ITLPKLKYALNALSPHISEETLNFHYNKHHAGYVNKLNTLIKDTPFAEKSLLDIVKESSG 62
+TLP LK+ AL P+IS + HY KHH YVN NT + F E S L + KE S
Sbjct: 28 VTLPDLKWDFGALEPYISGQINELHYTKHHQTYVNGFNTAVDQ--FQELSDL-LAKEPSP 84
Query: 63 A-----------IFNNAAQIWNHTFYWDSMGPDC--GGEPH-GEIKEKIQEDFGSFNNFK 108
A I + NH +W+++ P+ GGEP G + + I E FGS +
Sbjct: 85 ANARKMIAIQQNIKFHGGGFTNHCLFWENLAPESQGGGEPPTGALAKAIDEQFGSLDELI 144
Query: 109 EQFSNILCGHFGSGWGWLA--LNNNNKLVILQTHDAGNPIKDNTG--IPILTCDIWEHAY 164
+ + L G GSGW ++ L+N KL ++QT++ TG +P++ D WEHAY
Sbjct: 145 KLTNTKLAGVQGSGWAFIVKNLSNGGKLDVVQTYNQDTV----TGPLVPLVAIDAWEHAY 200
Query: 165 YIDYRNDRASYVKAWWNLVNWNFAN 189
Y+ Y+N +A Y KA WN+VNW A+
Sbjct: 201 YLQYQNKKADYFKAIWNVVNWKEAS 225
Score = 13.1 bits (22), Expect = 4.3
Identities = 4/8 (50%), Positives = 5/8 (62%)
Query: 185 WNFANENL 192
W F +NL
Sbjct: 159 WAFIVKNL 166
Lambda K H
0.318 0.135 0.442
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 165
Number of extensions: 13
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 198
Length of database: 233
Length adjustment: 22
Effective length of query: 176
Effective length of database: 211
Effective search space: 37136
Effective search space used: 37136
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 19 (11.6 bits)
S2: 19 (11.9 bits)