Query= PF08_0075 Pf Annotation|Plasmodium_falciparum_Sanger|(protein coding) 60S ribosomal protein L13, putative (215 letters)
>FBgn0011272 type=protein;
           loc=2L:join(9967635..9967877,9967939..9968247,
           9968317..9968421); ID=FBpp0099517; name=RpL13-PB;
           parent=FBgn0011272,FBtr0100164;
           dbxref=FlyBase_Annotation_IDs:CG4651-PB,
           FlyBase:FBpp0099517,GB_protein:ABC65888.1,
           GB_protein:ABC65888;
           MD5=6aea7ab718156ab77fd20fc1241572d5; release=r5.1;
           species=Dmel; length=218;
          Length = 218

 Score =  121 bits (304), Expect = 9e-33
 Identities = 74/212 (34%), Positives = 112/212 (52%), Gaps = 11/212 (5%)

Query: 5   NNVLPNVHLHKWWQRHVRVNFSKNIXXXXXXXXXXXXXXANGGTPIE-KLHPIVHCPTQR 63
           NN++PN H HKWWQRHV+  F++                A    P    L P+V CPT R
Sbjct: 5   NNMIPNQHYHKWWQRHVKTWFNQPARKVRRHANRVKKAKAVFPRPASGALRPVVRCPTIR 64

Query: 64  YNFRTRLGKGFTFEELKGAGLTPRAAQTIGICYDKRRKNRSEESLTKNVERLLKYKNSLV 123
           Y+ + R G+GFT EELKGAG+    A+TIGI  D+RRKN+S ES  +N++RL +Y++ L+
Sbjct: 65  YHTKLRAGRGFTLEELKGAGIGANFAKTIGIAVDRRRKNKSLESRQRNIQRLKEYRSKLI 124

Query: 124 MXXXXXXXXXXXXXXXXXXXDKNTIKEFRNKKPLLSIFKKEKNTKP-FYETIEVSKIDKE 182
           +                    +++++E +    L       KN +P   E  EV+K +K+
Sbjct: 125 L---------FPINEKKIRAGESSLEECKLATQLKGPVLPIKNEQPAVVEFREVTKDEKK 175

Query: 183 FLAYKTLRRAKLAERRKNRRQQKKDIKFKSKD 214
           F A+ TLR+A+   R    R ++     +S+D
Sbjct: 176 FKAFATLRKARTDARLVGIRAKRAKEAAESED 207
Lambda     K      H
   0.319    0.134    0.393 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 144
Number of extensions: 8
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 215
Length of database: 218
Length adjustment: 22
Effective length of query: 193
Effective length of database: 196
Effective search space:    37828
Effective search space used:    37828
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 19 (11.6 bits)
S2: 19 (11.9 bits)