Query= PF08_0075 Pf Annotation|Plasmodium_falciparum_Sanger|(protein coding) 60S ribosomal protein L13, putative (215 letters)
>YDL082W RPL13A SGDID:S000002240, Chr IV from
           308424-308427,308793-309388, Verified ORF, "Protein
           component of the large (60S) ribosomal subunit, nearly
           identical to Rpl13Bp; not essential for viability; has
           similarity to rat L13 ribosomal protein"
          Length = 199

 Score = 86.3 bits (212), Expect = 4e-22
 Identities = 42/113 (37%), Positives = 63/113 (55%)

Query: 12  HLHKWWQRHVRVNFSKNIXXXXXXXXXXXXXXANGGTPIEKLHPIVHCPTQRYNFRTRLG 71
           H  K WQ  V+V+F +                     P++ L P+V  PT +YN + R G
Sbjct: 13  HFRKHWQERVKVHFDQAGKKVSRRNARATRAAKIAPRPLDLLRPVVRAPTVKYNRKVRAG 72

Query: 72  KGFTFEELKGAGLTPRAAQTIGICYDKRRKNRSEESLTKNVERLLKYKNSLVM 124
           +GFT  E+K AGLT   A+TIGI  D RR+NR++E    NV+RL +Y++ +++
Sbjct: 73  RGFTLAEVKAAGLTAAYARTIGIAVDHRRQNRNQEIFDANVQRLKEYQSKIIV 125

 Score = 15.8 bits (29), Expect = 0.61
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 197 RRKNRRQQ 204
           RR+NR Q+
Sbjct: 100 RRQNRNQE 107
Lambda     K      H
   0.319    0.134    0.393 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 115
Number of extensions: 5
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 215
Length of database: 199
Length adjustment: 21
Effective length of query: 194
Effective length of database: 178
Effective search space:    34532
Effective search space used:    34532
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 19 (11.6 bits)
S2: 19 (11.9 bits)