Query= PF08_0076 Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding) 40S ribosomal
protein S16, putative
(144 letters)
>FBgn0034743 type=protein;
loc=2R:join(18493663..18493674,18493752..18493793,
18494014..18494145,18494439..18494553,
18495260..18495405); ID=FBpp0071766; name=RpS16-PA;
parent=FBgn0034743,FBtr0071855;
dbxref=FlyBase:FBpp0071766,
FlyBase_Annotation_IDs:CG4046-PA,GB_protein:AAF46862.1,
GB_protein:AAF46862;
MD5=e7f0408a4696f9329449eb7f556de5eb; release=r5.1;
species=Dmel; length=148;
Length = 148
Score = 175 bits (443), Expect = 3e-49
Identities = 82/140 (58%), Positives = 106/140 (75%)
Query: 5 VKRVQTFGXXXXXXXXXXXXNGKGLIKLNGKNLDLVEPYILKTKVYEPLWLIGSGKLKNL 64
V+ VQ FG G GL+K+NG+ L+ +EP +L+ K+ EPL L+G K +
Sbjct: 9 VQAVQVFGRKKTATAVAYCKRGNGLLKVNGRPLEQIEPKVLQYKLQEPLLLLGKEKFAGV 68
Query: 65 DIRIRVKGGGQTSQIYAIRQAIGKGIISYYQKYVDESTKKELKDVLLRYDRSLLVGDTRR 124
DIR+RV GGG +QIYAIRQAI K ++++YQKYVDE++KKE+KD+L++YDR+LLVGD RR
Sbjct: 69 DIRVRVSGGGHVAQIYAIRQAISKALVAFYQKYVDEASKKEIKDILVQYDRTLLVGDPRR 128
Query: 125 CEPKKFGGKGARARYQKSYR 144
CEPKKFGG GARARYQKSYR
Sbjct: 129 CEPKKFGGPGARARYQKSYR 148
Lambda K H
0.318 0.140 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 111
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 144
Length of database: 148
Length adjustment: 16
Effective length of query: 128
Effective length of database: 132
Effective search space: 16896
Effective search space used: 16896
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 16 (10.2 bits)
S2: 16 (10.8 bits)