Query= PF08_0076 Pf Annotation|Plasmodium_falciparum_Sanger|(protein coding) 40S ribosomal protein S16, putative (144 letters)
>YDL083C RPS16B SGDID:S000002241, Chr IV from
           307789-307766,307333-306926, reverse complement,
           Verified ORF, "Protein component of the small (40S)
           ribosomal subunit; identical to Rps16Ap and has
           similarity to E. coli S9 and rat S16 ribosomal proteins"
          Length = 143

 Score =  173 bits (438), Expect = 1e-48
 Identities = 85/140 (60%), Positives = 102/140 (72%)

Query: 5   VKRVQTFGXXXXXXXXXXXXNGKGLIKLNGKNLDLVEPYILKTKVYEPLWLIGSGKLKNL 64
           V  VQTFG             GKGLIK+NG  + LVEP IL+ KVYEPL L+G  K  N+
Sbjct: 4   VPSVQTFGKKKSATAVAHVKAGKGLIKVNGSPITLVEPEILRFKVYEPLLLVGLDKFSNI 63

Query: 65  DIRIRVKGGGQTSQIYAIRQAIGKGIISYYQKYVDESTKKELKDVLLRYDRSLLVGDTRR 124
           DIR+RV GGG  SQ+YAIRQAI KG+++Y+QKYVDE +K ELK     YDR+LL+ D+RR
Sbjct: 64  DIRVRVTGGGHVSQVYAIRQAIAKGLVAYHQKYVDEQSKNELKKAFTSYDRTLLIADSRR 123

Query: 125 CEPKKFGGKGARARYQKSYR 144
            EPKKFGGKGAR+R+QKSYR
Sbjct: 124 PEPKKFGGKGARSRFQKSYR 143
Lambda     K      H
   0.318    0.140    0.400 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 117
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 144
Length of database: 143
Length adjustment: 16
Effective length of query: 128
Effective length of database: 127
Effective search space:    16256
Effective search space used:    16256
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 16 (10.2 bits)
S2: 16 (10.8 bits)