Query= PF08_0092 Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding) hypothetical
protein
(912 letters)
>YBR034C HMT1 SGDID:S000000238, Chr II from 305976-304930, reverse
complement, Verified ORF, "Nuclear SAM-dependent mono-
and asymmetric arginine dimethylating methyltransferase
that modifies hnRNPs, including Npl3p and Hrp1p, thus
facilitating nuclear export of these proteins; required
for viability of npl3 mutants"
Length = 348
Score = 159 bits (403), Expect = 2e-43
Identities = 97/283 (34%), Positives = 153/283 (54%), Gaps = 35/283 (12%)
Query: 496 KEDIHEIDKKYFDSYNYSDIHRTMILDKCRTQCYYDFINKNKEIFENKIVLDIGCGSSII 555
K + E ++ YF+SY++ IH M+ D RT Y + I +NK++F++KIVLD+GCG+ I+
Sbjct: 13 KTKLSESEQHYFNSYDHYGIHEEMLQDTVRTLSYRNAIIQNKDLFKDKIVLDVGCGTGIL 72
Query: 556 SLFCSDY-AKVVVGIDNAEKILEKAKKITEINK-AKNIYLFKGKLEDHNIYVDEKNEIYY 613
S+F + + AK V+G+D + I+E AK++ E+N + I L +GKLED
Sbjct: 73 SMFAAKHGAKHVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKLED------------- 118
Query: 614 LNKDLDIETFEKSNNVKLKILKFDIIISEWMGYFLFYECMINTILYARDKYLKENGYIFP 673
V L K DIIISEWMGYFL YE M++T+LYARD YL E G IFP
Sbjct: 119 ---------------VHLPFPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIFP 163
Query: 674 NKIYLYMSGYNDMEYIKDNLLIWDKPMYNKNLYELKPNNQEFMETAKIMYVDKNNVSSEI 733
+K ++++G D +Y + L W + +Y ++ P + + V++NNV++
Sbjct: 164 DKCSIHLAGLEDSQYKDEKLNYW-QDVYG---FDYSPFVPLVLHEPIVDTVERNNVNTTS 219
Query: 734 INYGIIDMYTYNKEYFYINVDFKIPLKENKIVTSLCFYFDCLF 776
D+ T +FK+ K ++ + +FD +F
Sbjct: 220 DKLIEFDLNTVKISDLAFKSNFKLTAKRQDMINGIVTWFDIVF 262
Score = 22.3 bits (46), Expect = 0.052
Identities = 10/22 (45%), Positives = 11/22 (50%)
Query: 601 HNIYVDEKNEIYYLNKDLDIET 622
H Y K I+Y DLD ET
Sbjct: 278 HAPYTHWKQTIFYFPDDLDAET 299
Score = 16.2 bits (30), Expect = 3.7
Identities = 4/19 (21%), Positives = 12/19 (63%)
Query: 315 KKTRINGLPNKFEHHFDHF 333
+KT+++ + + +DH+
Sbjct: 12 EKTKLSESEQHYFNSYDHY 30
Score = 15.0 bits (27), Expect = 8.3
Identities = 5/8 (62%), Positives = 7/8 (87%)
Query: 238 SKYDEEKL 245
S+Y +EKL
Sbjct: 176 SQYKDEKL 183
Lambda K H
0.316 0.135 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 836
Number of extensions: 54
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 5
Length of query: 912
Length of database: 348
Length adjustment: 36
Effective length of query: 876
Effective length of database: 312
Effective search space: 273312
Effective search space used: 273312
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 27 (15.2 bits)
S2: 27 (15.0 bits)