Query= PF08_0096 Pf Annotation|Plasmodium_falciparum_Sanger|(protein coding) RNA helicase, putative (941 letters)
>FBgn0003970 type=protein;
           loc=2L:join(15068406..15068429,15068483..15068870,
           15072338..15072627,15072687..15073430,
           15073489..15073702,15073767..15074038,
           15074110..15074163); ID=FBpp0080262; name=vas-PA;
           parent=FBgn0003970,FBtr0080701;
           dbxref=FlyBase:FBpp0080262,
           FlyBase_Annotation_IDs:CG3506-PA,GB_protein:AAF53438.1,
           GB_protein:AAF53438;
           MD5=4d8f61b2fd2fae122b043b6d6b827996; release=r5.1;
           species=Dmel; length=661;
          Length = 661

 Score =  300 bits (767), Expect = 3e-85
 Identities = 182/439 (41%), Positives = 253/439 (57%), Gaps = 44/439 (10%)

Query: 335 GVNFDLYNSIPVEISGFNSENVAAIETFDDPXXXXXXXXXXXIKKVNYDKTTPIQKYSLN 394
           G++F  YN+IPV+++G  S+    I+ F              + K  Y   TPIQK S+ 
Sbjct: 222 GIHFSKYNNIPVKVTG--SDVPQPIQHFTSADLRDIIIDN--VNKSGYKIPTPIQKCSIP 277

Query: 395 IIMNRNDLIGVAQTGSGKTAGYLLPIINHMLINDPPKHTYYEQNNKTSNYYFNRVCLPIC 454
           +I +  DL+  AQTGSGKTA +LLPI++ +L  DP +                 +  P  
Sbjct: 278 VISSGRDLMACAQTGSGKTAAFLLPILSKLL-EDPHEL---------------ELGRPQV 321

Query: 455 LILAPTRELAVQIFYDAKKFCFETGIKPVVLYGGNNIKTQLSNLDKGADIIVATPGRLND 514
           +I++PTRELA+QIF +A+KF FE+ +K  ++YGG + + Q   + +G  +++ATPGRL D
Sbjct: 322 VIVSPTRELAIQIFNEARKFAFESYLKIGIVYGGTSFRHQNECITRGCHVVIATPGRLLD 381

Query: 515 ILEKGKIKLFLTTFLVLDEADRMLDMGFSPQIRSIVNDYDMPGNDNDVHTSENKVEYKKY 574
            +++  I    T F+VLDEADRMLDMGFS  +R I+    M                   
Sbjct: 382 FVDRTFITFEDTRFVVLDEADRMLDMGFSEDMRRIMTHVTMRP----------------- 424

Query: 575 CNDIIKRQTIMFSATFRKEIQVLAKEYLCKYTFLLVGKVGSTNEYIKQNLVFVEEENKCX 634
                + QT+MFSATF +EIQ +A E+L  Y F+ +G VG     +KQ +  V +  K  
Sbjct: 425 -----EHQTLMFSATFPEEIQRMAGEFLKNYVFVAIGIVGGACSDVKQTIYEVNKYAK-R 478

Query: 635 XXXXXXXXXXXXXTILFVETKRKADIIERFLSNQKLNAVCIHGDKSQDERERALKLFKRG 694
                        TI+FVETKR AD +  FLS ++     IHGD+ Q +RE+AL+ FK G
Sbjct: 479 SKLIEILSEQADGTIVFVETKRGADFLASFLSEKEFPTTSIHGDRLQSQREQALRDFKNG 538

Query: 695 IKNILVATDVAARGLDISNIKHVINFDLPSNIDDYIHRIGRTGRAGNIGIATSFVN-EDN 753
              +L+AT VA+RGLDI NIKHVIN+D+PS IDDY+HRIGRTGR GN G ATSF + E +
Sbjct: 539 SMKVLIATSVASRGLDIKNIKHVINYDMPSKIDDYVHRIGRTGRVGNNGRATSFFDPEKD 598

Query: 754 KNIFKDLLATLEECNQQIP 772
           + I  DL+  LE   Q +P
Sbjct: 599 RAIAADLVKILEGSGQTVP 617

 Score = 16.9 bits (32), Expect = 4.5
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 171 NNENNMMHD 179
           NN NN++ D
Sbjct: 186 NNNNNIVED 194
Lambda     K      H
   0.317    0.136    0.395 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 1070
Number of extensions: 49
Number of successful extensions: 9
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 941
Length of database: 661
Length adjustment: 41
Effective length of query: 900
Effective length of database: 620
Effective search space:   558000
Effective search space used:   558000
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 29 (16.1 bits)
S2: 29 (15.8 bits)