Query= PF10_0038 Pf
Annotation|Plasmodium_falciparum_TIGR|(protein coding) ribosomal
protein S20e, putative
(118 letters)
>FBgn0019936 type=protein;
loc=3R:join(16647993..16647995,16648140..16648295,
16648524..16648613,16648854..16648967); ID=FBpp0083371;
name=RpS20-PA; parent=FBgn0019936,FBtr0083964;
dbxref=FlyBase:FBpp0083371,
FlyBase_Annotation_IDs:CG15693-PA,GB_protein:AAF55809.1,
GB_protein:AAF55809;
MD5=3b4eeffb6f1e4ae3364b6e9e8b18e234; release=r5.1;
species=Dmel; length=120;
Length = 120
Score = 143 bits (360), Expect = 8e-40
Identities = 65/102 (63%), Positives = 86/102 (84%)
Query: 16 LRRIRIALTSKNLRAIEKVCSDIMKGAKEKNLNVSGPVRLPVKTLRITTRKSPCGEGTNT 75
+ RIRI LTS+N+R++E VC D++ GAK +NL V GPVR+P KTLRITTRK+PCGEG+ T
Sbjct: 19 VHRIRITLTSRNVRSLENVCRDLINGAKNQNLRVKGPVRMPTKTLRITTRKTPCGEGSKT 78
Query: 76 WDRFELRIYKRLIDLYSQCEVVTQMTSINIDPVVEVEVIITD 117
WDRF++RI+KR+IDL+S E+V ++TSINI+P VEVEV I +
Sbjct: 79 WDRFQMRIHKRIIDLHSPSEIVKKITSINIEPGVEVEVTIAN 120
Lambda K H
0.319 0.135 0.380
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 82
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 118
Length of database: 120
Length adjustment: 13
Effective length of query: 105
Effective length of database: 107
Effective search space: 11235
Effective search space used: 11235
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 6.9 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 15 ( 9.8 bits)
S2: 15 (10.4 bits)