Query= PF10_0038 Pf Annotation|Plasmodium_falciparum_TIGR|(protein coding) ribosomal protein S20e, putative (118 letters)
>YHL015W RPS20 SGDID:S000001007, Chr VIII from 75409-75774, Verified
           ORF, "Protein component of the small (40S) ribosomal
           subunit; overproduction suppresses mutations affecting
           RNA polymerase III-dependent transcription; has
           similarity to E. coli S10 and rat S20 ribosomal
           proteins"
          Length = 121

 Score =  108 bits (269), Expect = 3e-29
 Identities = 49/109 (44%), Positives = 80/109 (73%)

Query: 10  DNEKYRLRRIRIALTSKNLRAIEKVCSDIMKGAKEKNLNVSGPVRLPVKTLRITTRKSPC 69
           + ++ ++ +IRI LTS  ++ +E V S+I+K A++ NL   GPVRLP K L+I+TRK+P 
Sbjct: 13  EQQQQQIIKIRITLTSTKVKQLENVSSNIVKNAEQHNLVKKGPVRLPTKVLKISTRKTPN 72

Query: 70  GEGTNTWDRFELRIYKRLIDLYSQCEVVTQMTSINIDPVVEVEVIITDS 118
           GEG+ TW+ +E+RI+KR IDL +  ++V ++T I I+P V+VEV++  +
Sbjct: 73  GEGSKTWETYEMRIHKRYIDLEAPVQIVKRITQITIEPGVDVEVVVASN 121
Lambda     K      H
   0.319    0.135    0.380 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 53
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 118
Length of database: 121
Length adjustment: 13
Effective length of query: 105
Effective length of database: 108
Effective search space:    11340
Effective search space used:    11340
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 6.9 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 15 ( 9.8 bits)
S2: 15 (10.4 bits)