Query= PF10_0038 Pf
Annotation|Plasmodium_falciparum_TIGR|(protein coding) ribosomal
protein S20e, putative
(118 letters)
>YHL015W RPS20 SGDID:S000001007, Chr VIII from 75409-75774, Verified
ORF, "Protein component of the small (40S) ribosomal
subunit; overproduction suppresses mutations affecting
RNA polymerase III-dependent transcription; has
similarity to E. coli S10 and rat S20 ribosomal
proteins"
Length = 121
Score = 108 bits (269), Expect = 3e-29
Identities = 49/109 (44%), Positives = 80/109 (73%)
Query: 10 DNEKYRLRRIRIALTSKNLRAIEKVCSDIMKGAKEKNLNVSGPVRLPVKTLRITTRKSPC 69
+ ++ ++ +IRI LTS ++ +E V S+I+K A++ NL GPVRLP K L+I+TRK+P
Sbjct: 13 EQQQQQIIKIRITLTSTKVKQLENVSSNIVKNAEQHNLVKKGPVRLPTKVLKISTRKTPN 72
Query: 70 GEGTNTWDRFELRIYKRLIDLYSQCEVVTQMTSINIDPVVEVEVIITDS 118
GEG+ TW+ +E+RI+KR IDL + ++V ++T I I+P V+VEV++ +
Sbjct: 73 GEGSKTWETYEMRIHKRYIDLEAPVQIVKRITQITIEPGVDVEVVVASN 121
Lambda K H
0.319 0.135 0.380
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 53
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 118
Length of database: 121
Length adjustment: 13
Effective length of query: 105
Effective length of database: 108
Effective search space: 11340
Effective search space used: 11340
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 6.9 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 15 ( 9.8 bits)
S2: 15 (10.4 bits)