Query= PF10_0043 Pf
Annotation|Plasmodium_falciparum_TIGR|(protein coding) ribosomal
protein L13, putative
(202 letters)
>FBgn0037351 type=protein;
loc=3R:join(1450222..1450242,1450612..1450852,
1451236..1451591); ID=FBpp0078354; name=RpL13A-PB;
parent=FBgn0037351,FBtr0078705;
dbxref=FlyBase:FBpp0078354,
FlyBase_Annotation_IDs:CG1475-PB,GB_protein:AAF51987.1,
GB_protein:AAF51987;
MD5=b12cede152a797013706236cb3f27e6d; release=r5.1;
species=Dmel; length=205;
Length = 205
Score = 181 bits (459), Expect = 8e-51
Identities = 81/154 (52%), Positives = 113/154 (73%)
Query: 7 VIDCKGHLLGRLASLIAKELLNGQRIVAVRCEDINISGSLYRNKLKYQEFLRLRTNTNPK 66
VID +GHLLGRLAS++AK LL G ++ VRCE++N+SG YRNK+K+ +LR R N NP
Sbjct: 10 VIDGRGHLLGRLASVVAKYLLQGGKVAVVRCEELNLSGHFYRNKIKFLAYLRKRCNVNPA 69
Query: 67 KGPLHLREPSKILWRCVRGMLPHKTYKGQLALKKLKVCVGMPYPYDKKKKYVLPSALRAF 126
+GP H R PS+I ++ VRGM+PHKT +GQ AL +L+V G+P PYDK+++ V+P A+R
Sbjct: 70 RGPFHFRAPSRIFYKAVRGMIPHKTKRGQAALARLRVFDGIPSPYDKRRRVVVPIAMRVL 129
Query: 127 RLKKHRRYCRLGTLSSRVGWNYDTLVKKNEVLRK 160
L+ R+YC++G LS VGW+Y ++K E RK
Sbjct: 130 TLRSDRKYCQVGRLSHEVGWHYQDVIKSLERKRK 163
Score = 12.7 bits (21), Expect = 5.0
Identities = 7/31 (22%), Positives = 13/31 (41%)
Query: 83 VRGMLPHKTYKGQLALKKLKVCVGMPYPYDK 113
+R L H +L +K + P++K
Sbjct: 166 LRVTLKHNRELKKLTVKARENIAKAAEPFNK 196
Lambda K H
0.322 0.139 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 146
Number of extensions: 6
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 202
Length of database: 205
Length adjustment: 21
Effective length of query: 181
Effective length of database: 184
Effective search space: 33304
Effective search space used: 33304
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 19 (11.7 bits)
S2: 19 (11.9 bits)