Query= PF10_0043 Pf Annotation|Plasmodium_falciparum_TIGR|(protein coding) ribosomal protein L13, putative (202 letters)
>YNL069C RPL16B SGDID:S000005013, Chr XIV from
           495002-494975,494525-493957, reverse complement,
           Verified ORF, "N-terminally acetylated protein component
           of the large (60S) ribosomal subunit, binds to 5.8 S
           rRNA; has similarity to Rpl16Ap, E. coli L13 and rat
           L13a ribosomal proteins; transcriptionally regulated by
           Rap1p"
          Length = 198

 Score =  186 bits (473), Expect = 2e-52
 Identities = 92/161 (57%), Positives = 116/161 (72%)

Query: 7   VIDCKGHLLGRLASLIAKELLNGQRIVAVRCEDINISGSLYRNKLKYQEFLRLRTNTNPK 66
           VID K HLLGRLAS IAK++LNGQ+IV VR E +NISG  +RNKLKY +FLR  T  N  
Sbjct: 7   VIDAKDHLLGRLASTIAKQVLNGQKIVVVRAEALNISGEFFRNKLKYHDFLRKATAFNKT 66

Query: 67  KGPLHLREPSKILWRCVRGMLPHKTYKGQLALKKLKVCVGMPYPYDKKKKYVLPSALRAF 126
           +GP H R PS+IL++ +RGM+ HKT +G+ AL++LK+  G+P PYDKKK+ V+P ALR  
Sbjct: 67  RGPFHFRAPSRILYKAIRGMVSHKTARGKAALERLKIFEGIPPPYDKKKRVVVPQALRVL 126

Query: 127 RLKKHRRYCRLGTLSSRVGWNYDTLVKKNEVLRKQVSKAYY 167
           RLK  R+Y  LG LS+ VGW Y+ +V K E  RK  S  YY
Sbjct: 127 RLKPGRKYTTLGKLSTSVGWKYEDVVAKLEDKRKVRSAEYY 167
Lambda     K      H
   0.322    0.139    0.419 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 135
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 202
Length of database: 198
Length adjustment: 21
Effective length of query: 181
Effective length of database: 177
Effective search space:    32037
Effective search space used:    32037
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 19 (11.7 bits)
S2: 19 (11.9 bits)