>YCL011C GBP2 SGDID:S000000517, Chr III from 103358-102075, reverse
           complement, Verified ORF, "Poly(A+) RNA-binding protein,
           involved in the export of mRNAs from the nucleus to the
           cytoplasm; similar to Hrb1p and Npl3p; also binds
           single-stranded telomeric repeat sequence in vitro"
          Length = 427

 Score = 64.7 bits (156), Expect = 3e-15
 Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 6/92 (6%)

Query: 11  GCRVYVGNLPWKVTWPILKNHMKKAGDVVRVDIFEDTQGRSKGCGIVEYATYEEAQEAIS 70
           G  V++ NLP+ + W  LK+  K+ G V+R D+  D  G S+G G V Y T +E   AI 
Sbjct: 218 GFEVFIINLPYSMNWQSLKDMFKECGHVLRADVELDFNGFSRGFGSVIYPTEDEMIRAID 277

Query: 71  SLNDSKLEDRLIFVREDREENSGNFEKRKFNN 102
           + N  ++E R++ VRE      G F KRK N+
Sbjct: 278 TFNGMEVEGRVLEVRE------GRFNKRKNND 303

 Score = 52.0 bits (123), Expect = 2e-11
 Identities = 26/71 (36%), Positives = 40/71 (56%)

Query: 170 LIVYNLPPQVTWKELKDLFRKHGRVVRADLKNEDNSSKELIGVVIMENEYEAKNAIDALN 229
           + + NLP  + W+ LKD+F++ G V+RAD++ + N      G VI   E E   AID  N
Sbjct: 221 VFIINLPYSMNWQSLKDMFKECGHVLRADVELDFNGFSRGFGSVIYPTEDEMIRAIDTFN 280

Query: 230 FCNFDGYILKV 240
               +G +L+V
Sbjct: 281 GMEVEGRVLEV 291

 Score = 47.0 bits (110), Expect = 6e-10
 Identities = 26/80 (32%), Positives = 40/80 (50%)

Query: 167 NCTLIVYNLPPQVTWKELKDLFRKHGRVVRADLKNEDNSSKELIGVVIMENEYEAKNAID 226
           NC +   NLP      +L DLF   G++  A+LK ++N     + VV  EN  +A   I 
Sbjct: 348 NCFIYCSNLPFSTARSDLFDLFGPIGKINNAELKPQENGQPTGVAVVEYENLVDADFCIQ 407

Query: 227 ALNFCNFDGYILKVNYENNE 246
            LN  N+ G  L+++Y   +
Sbjct: 408 KLNNYNYGGCSLQISYARRD 427

 Score = 45.8 bits (107), Expect = 1e-09
 Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 3/87 (3%)

Query: 14  VYVGNLPWKVTWPILKNHMKKAGDVVRVDIFEDTQGRSKGCGIVEYATYEEAQEAISSLN 73
           ++V NL +  T   LK      G+VV  DI   ++G  +G G VE+   E  Q+AIS  +
Sbjct: 124 IFVRNLTFDCTPEDLKELFGTVGEVVEADIIT-SKGHHRGMGTVEFTKNESVQDAISKFD 182

Query: 74  DSKLEDRLIFVREDR--EENSGNFEKR 98
            +   DR + VR+D    E +  F K+
Sbjct: 183 GALFMDRKLMVRQDNPPPEAAKEFSKK 209

 Score = 32.3 bits (72), Expect = 2e-05
 Identities = 17/70 (24%), Positives = 28/70 (40%)

Query: 5   NNSPSKGCRVYVGNLPWKVTWPILKNHMKKAGDVVRVDIFEDTQGRSKGCGIVEYATYEE 64
           N    + C +Y  NLP+      L +     G +   ++     G+  G  +VEY    +
Sbjct: 342 NPGGDRNCFIYCSNLPFSTARSDLFDLFGPIGKINNAELKPQENGQPTGVAVVEYENLVD 401

Query: 65  AQEAISSLND 74
           A   I  LN+
Sbjct: 402 ADFCIQKLNN 411

 Score = 27.7 bits (60), Expect = 4e-04
 Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 1/76 (1%)

Query: 169 TLIVYNLPPQVTWKELKDLFRKHGRVVRADLKNEDNSSKELIGVVIMENEYEAKNAIDAL 228
           ++ V NL    T ++LK+LF   G VV AD+       + +  V   +NE   ++AI   
Sbjct: 123 SIFVRNLTFDCTPEDLKELFGTVGEVVEADIITSKGHHRGMGTVEFTKNE-SVQDAISKF 181

Query: 229 NFCNFDGYILKVNYEN 244
           +   F    L V  +N
Sbjct: 182 DGALFMDRKLMVRQDN 197

 Score = 15.4 bits (28), Expect = 2.0
 Identities = 6/14 (42%), Positives = 8/14 (57%)

Query: 40  RVDIFEDTQGRSKG 53
           R +  EDT+G   G
Sbjct: 308 RREDLEDTRGTEPG 321

Lambda     K      H
   0.315    0.134    0.394 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 301
Number of extensions: 17
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 9
Number of HSP's successfully gapped: 7
Length of query: 246
Length of database: 427
Length adjustment: 28
Effective length of query: 218
Effective length of database: 399
Effective search space:    86982
Effective search space used:    86982
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 23 (13.4 bits)
S2: 23 (13.5 bits)