Query= PF10_0081 Pf
Annotation|Plasmodium_falciparum_TIGR|(protein coding) 26S proteasome
regulatory subunit 4, putative
(455 letters)
>FBgn0015282 type=protein;
loc=3R:complement(19755668..19756984,
19757046..19757048); ID=FBpp0083906; name=Pros26.4-PA;
parent=FBgn0015282,FBtr0084520;
dbxref=FlyBase:FBpp0083906,
FlyBase_Annotation_IDs:CG5289-PA,GB_protein:AAF56205.1,
GB_protein:AAF56205;
MD5=8bbd76fd6feaf70fff47dd693733abbe; release=r5.1;
species=Dmel; length=439;
Length = 439
Score = 625 bits (1612), Expect = 0.0
Identities = 306/410 (74%), Positives = 364/410 (88%), Gaps = 1/410 (0%)
Query: 47 SHMGXXXXXXXGTSGHSKLPNVTPNTKCRLKLLKLERIKDYLLLEEEYITNQEQIKSSDD 106
+ +G G KLP VTP+T+CRLKLLKLERIKDYL++E+E+I NQE++K D+
Sbjct: 30 TRVGKKKRRAKGPDAAMKLPQVTPHTRCRLKLLKLERIKDYLMMEDEFIRNQERLKPQDE 89
Query: 107 KNYV-KLKIDDLRGSPVSVGTLEELIDENHGIIATSVGPEYYVNILSFVDKDLLEPGCSV 165
KN + K+DDLRG+P+SVG LEE+ID+NH I++TSVG E+YV+ILSFVDKD LEPGCSV
Sbjct: 90 KNEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSV 149
Query: 166 LLNNKTNSVVGILLDEVDPLVSVMKVEKAPLESYADIGGLESQIQEIKEAVELPLTHPEL 225
LLN+K ++VVG+L D+ DP+V+VMK+EKAP E+YADIGGL++QIQEIKE+VELPLTHPE
Sbjct: 150 LLNHKVHAVVGVLSDDTDPMVTVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPEY 209
Query: 226 YEDIGIKPPKGVILYGPPGTGKTLLAKAVANETSATFLRVVGSELIQKYLGDGPKLVREM 285
YE++GIKPPKGVILYGPPGTGKTLLAKAVAN+TSATFLRVVGSELIQKYLGDGPKLVRE+
Sbjct: 210 YEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVREL 269
Query: 286 FKVAEEHAPSIVFIDEIDAVGTKRYEATSGGEREIQRTMLELLNQLDGFDSRGDVKVIMA 345
F+VAEEHAPSIVFIDEIDAVGTKRY++ SGGEREIQRTMLELLNQLDGFDSRGDVKVIMA
Sbjct: 270 FRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMA 329
Query: 346 TNRIDSLDPALIRPGRIDRKIQLPNPDTKTKRRIFQIHTSKMTMSPDVDLEEFVMSKDEL 405
TNRI++LDPALIRPGRIDRKI+ P PD KTKRRIF IHTS+MT++ DV+L E +M+KD+L
Sbjct: 330 TNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLAEDVNLSELIMAKDDL 389
Query: 406 SGADIKAICTEAGLLALRERRMKITQADLRKARDKALFQKKGNIPEGLYL 455
SGADIKAICTEAGL+ALRERRMK+T D +K+++ L++KK PEGLYL
Sbjct: 390 SGADIKAICTEAGLMALRERRMKVTNEDFKKSKESVLYRKKEGTPEGLYL 439
Lambda K H
0.317 0.137 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 673
Number of extensions: 21
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 455
Length of database: 439
Length adjustment: 33
Effective length of query: 422
Effective length of database: 406
Effective search space: 171332
Effective search space used: 171332
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 25 (14.3 bits)
S2: 25 (14.2 bits)