Query= PF10_0103 Pf
Annotation|Plasmodium_falciparum_TIGR|(protein coding) eukaryotic
translation initiation factor 2, beta, putative
(222 letters)
>YPL237W SUI3 SGDID:S000006158, Chr XVI from 100496-101353, Verified
ORF, "Beta subunit of the translation initiation factor
eIF2, involved in the identification of the start codon;
proposed to be involved in mRNA binding"
Length = 285
Score = 132 bits (331), Expect = 9e-36
Identities = 68/157 (43%), Positives = 104/157 (66%), Gaps = 5/157 (3%)
Query: 64 PYDELLHRIQDLINKHNIDLCISK---KYTIKPPQVVRVGSKKVAWINFKDICTIMNRNE 120
PY ELL R +++ +N +L + K+ I PP +R G KK + N +DI ++R+
Sbjct: 130 PYSELLSRFFNILRTNNPELAGDRSGPKFRIPPPVCLRDG-KKTIFSNIQDIAEKLHRSP 188
Query: 121 EHVFHFVLAELGTEGSIAGEGQLVLKGKYGPKHIEALLRKYITEYVTCQMCKSPNTTMEK 180
EH+ ++ AELGT GS+ G+ +LV+KGK+ K +E +LR+YI EYVTC+ CKS NT +++
Sbjct: 189 EHLIQYLFAELGTSGSVDGQKRLVIKGKFQSKQMENVLRRYILEYVTCKTCKSINTELKR 248
Query: 181 DSRTRLFHQHCNACGAKRSVTTIKSGFHALGRGERRK 217
+ RLF C +CG+ RSV++IK+GF A G+RR+
Sbjct: 249 EQSNRLFFMVCKSCGSTRSVSSIKTGFQAT-VGKRRR 284
Score = 12.7 bits (21), Expect = 7.8
Identities = 7/27 (25%), Positives = 8/27 (29%)
Query: 180 KDSRTRLFHQHCNACGAKRSVTTIKSG 206
KDS F + G K G
Sbjct: 89 KDSSVDAFEKELAKAGLDNVDAESKEG 115
Lambda K H
0.321 0.138 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 137
Number of extensions: 5
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 222
Length of database: 285
Length adjustment: 24
Effective length of query: 198
Effective length of database: 261
Effective search space: 51678
Effective search space used: 51678
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 21 (12.6 bits)
S2: 21 (12.7 bits)