>YPR103W PRE2 SGDID:S000006307, Chr XVI from 732347-733210, Verified
           ORF, "20S proteasome beta-type subunit, responsible for
           the chymotryptic activity of the proteasome"
          Length = 287

 Score =  190 bits (483), Expect = 3e-53
 Identities = 98/216 (45%), Positives = 144/216 (66%), Gaps = 6/216 (2%)

Query: 34  VAPVNVPRNFIKYAQTQNKKLFD----FHKGTTTLAFKFKDGIIVAVDSRASMGSFISSQ 89
           V P+  P+ F++ A T + +  D       GTTTLAF+F+ GIIVAVDSRA+ G++++SQ
Sbjct: 46  VPPIASPQQFLR-AHTDDSRNPDCKIKIAHGTTTLAFRFQGGIIVAVDSRATAGNWVASQ 104

Query: 90  NVXXXXXXXXXXLGTMAGGAADCLYWEKYLGKIIKIYELRNNEKISVRAASTILSNILYQ 149
            V          LGTMAGGAADC +WE +LG   +++ELR  E+ISV AAS ILSN++YQ
Sbjct: 105 TVKKVIEINPFLLGTMAGGAADCQFWETWLGSQCRLHELREKERISVAAASKILSNLVYQ 164

Query: 150 YKGYGLCCGIILSGYDH-TGFNMFYVDDSGKKVEGNLFSCGSGSTYAYSILDSAYDYNLN 208
           YKG GL  G ++ GY    G  ++YVD  G +++G++F  GSG T+AY +LDS Y ++L+
Sbjct: 165 YKGAGLSMGTMICGYTRKEGPTIYYVDSDGTRLKGDIFCVGSGQTFAYGVLDSNYKWDLS 224

Query: 209 LDQAVELARNAIYHATFRDGGSGGKVRVFHIHKNGY 244
           ++ A+ L + +I  A  RD  SGG V ++H+ ++G+
Sbjct: 225 VEDALYLGKRSILAAAHRDAYSGGSVNLYHVTEDGW 260

 Score = 16.5 bits (31), Expect = 0.67
 Identities = 6/21 (28%), Positives = 10/21 (47%)

Query: 164 YDHTGFNMFYVDDSGKKVEGN 184
           Y     N+++V + G    GN
Sbjct: 245 YSGGSVNLYHVTEDGWIYHGN 265

 Score = 12.7 bits (21), Expect = 9.6
 Identities = 4/8 (50%), Positives = 5/8 (62%)

Query: 203 YDYNLNLD 210
           YD   NL+
Sbjct: 20  YDNEQNLE 27

Lambda     K      H
   0.320    0.138    0.409 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 243
Number of extensions: 13
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 3
Length of query: 271
Length of database: 287
Length adjustment: 26
Effective length of query: 245
Effective length of database: 261
Effective search space:    63945
Effective search space used:    63945
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 21 (12.5 bits)
S2: 21 (12.7 bits)