Query= PF10_0153 Pf
Annotation|Plasmodium_falciparum_TIGR|(protein coding) hsp60
(580 letters)
>YLR259C HSP60 SGDID:S000004249, Chr XII from 665004-663286, reverse
complement, Verified ORF, "Tetradecameric mitochondrial
chaperonin required for ATP-dependent folding of
precursor polypeptides and complex assembly; prevents
aggregation and mediates protein refolding after heat
shock; role in mtDNA transmission; similarity to groEL"
Length = 572
Score = 586 bits (1510), Expect = e-171
Identities = 299/525 (56%), Positives = 400/525 (76%), Gaps = 4/525 (0%)
Query: 33 KDIRFGSDARTAMLTGCNKLADAVSVTLGPKGRNVIIEQSFGSPKITKDGVTVAKSIEFN 92
K+++FG + R ++L G LA+AV+ TLGPKGRNV+IEQ FG PKITKDGVTVAKSI
Sbjct: 25 KELKFGVEGRASLLKGVETLAEAVAATLGPKGRNVLIEQPFGPPKITKDGVTVAKSIVLK 84
Query: 93 NKLANLGAQMVKQVAANTNDKAGDGTTTATILARSIFQQGCKAVDSGMNPMDLLRGINKG 152
+K N+GA+++++VA+ TN+ AGDGTT+AT+L R+IF + K V +G NPMDL RG
Sbjct: 85 DKFENMGAKLLQEVASKTNEAAGDGTTSATVLGRAIFTESVKNVAAGCNPMDLRRGSQVA 144
Query: 153 VEKVLEYLNSIKKDVTTTEEIFNVASISANGDKNIGQLIADTMKKVGKEGTITVTEGKTL 212
VEKV+E+L++ KK++TT+EEI VA+ISANGD ++G+L+A M+KVGKEG IT+ EG+TL
Sbjct: 145 VEKVIEFLSANKKEITTSEEIAQVATISANGDSHVGKLLASAMEKVGKEGVITIREGRTL 204
Query: 213 QHELEIVEGIKFDRGYISPYFINNSKDQKVELDKPYILIHEKKISTVKSLLPVLEHVLQN 272
+ ELE+ EG++FDRG+ISPYFI + K KVE +KP +L+ EKKIS+++ +LP LE Q+
Sbjct: 205 EDELEVTEGMRFDRGFISPYFITDPKSSKVEFEKPLLLLSEKKISSIQDILPALEISNQS 264
Query: 273 QSSLLVIAEDVDSDALATLIVNKLRLGLKICAVKAPGFGEHRKALIHDIAVMTGAKVITE 332
+ LL+IAEDVD +ALA I+NKLR +K+CAVKAPGFG++RK I DIAV+TG V TE
Sbjct: 265 RRPLLIIAEDVDGEALAACILNKLRGQVKVCAVKAPGFGDNRKNTIGDIAVLTGGTVFTE 324
Query: 333 ETGLKLDDPQVVSYLGKAKSINVTKDSTLIMEGEGKKEEINERCESIRNAIKMNTSD-YE 391
E LK + + LG SI VTK+ T+I+ G G KE I ER E I+ +I + T++ YE
Sbjct: 325 ELDLK-PEQCTIENLGSCDSITVTKEDTVILNGSGPKEAIQERIEQIKGSIDITTTNSYE 383
Query: 392 KEKLQERLAKITGGVALIKVGGISEVEVNEIKDRIQDALCATKAAVEEGIVPGGGSALLF 451
KEKLQERLAK++GGVA+I+VGG SEVEV E KDR DAL AT+AAVEEGI+PGGG+AL+
Sbjct: 384 KEKLQERLAKLSGGVAVIRVGGASEVEVGEKKDRYDDALNATRAAVEEGILPGGGTALVK 443
Query: 452 ASKELDSVQTDNYDQRVGVNIIKDACKAPIKQIAENAGHEGSVVAGNILKEKNSNI--GF 509
AS+ LD V DN+DQ++GV+II+ A P KQI ENAG EGSV+ G ++ E + G+
Sbjct: 444 ASRVLDEVVVDNFDQKLGVDIIRKAITRPAKQIIENAGEEGSVIIGKLIDEYGDDFAKGY 503
Query: 510 NAQEGKYVDMIESGIIDPTKVVKTAISDAASIASLMTTTEVAIVD 554
+A + +Y DM+ +GIIDP KVV++ + DA+ +ASL+ TTEVAIVD
Sbjct: 504 DASKSEYTDMLATGIIDPFKVVRSGLVDASGVASLLATTEVAIVD 548
Lambda K H
0.312 0.131 0.351
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 808
Number of extensions: 32
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 580
Length of database: 572
Length adjustment: 36
Effective length of query: 544
Effective length of database: 536
Effective search space: 291584
Effective search space used: 291584
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 27 (15.1 bits)
S2: 27 (15.0 bits)