Query= PF10_0169 Pf
Annotation|Plasmodium_falciparum_TIGR|(protein coding)
phosphomannomutase, putative
(217 letters)
>YFL045C SEC53 SGDID:S000001849, Chr VI from 44392-43628, reverse
complement, Verified ORF, "Phosphomannomutase, involved
in synthesis of GDP-mannose and
dolichol-phosphate-mannose; required for folding and
glycosylation of secretory proteins in the ER lumen"
Length = 254
Score = 203 bits (517), Expect = 2e-57
Identities = 111/245 (45%), Positives = 155/245 (63%), Gaps = 34/245 (13%)
Query: 3 KKKAIFLFDVDGTLTISRKTIEQNVVDTLLELKSKKGFVLGIVGGSDYKKIREQIKYPEI 62
K + + LFDVDGTLT +R T+ + V TL +L++K +G VGGSD K EQ+ P +
Sbjct: 11 KPETLVLFDVDGTLTPARLTVSEEVRKTLAKLRNK--CCIGFVGGSDLSKQLEQLG-PNV 67
Query: 63 ---FDYIFSENGVVAHKNDEEYFAESIVNFLGEDRLKKLINYSLKYIANLDIPKKRGTFI 119
FDY FSENG+ A++ +E ++S +N+LGE++ KL + L+Y++ +D+PK+RGTF+
Sbjct: 68 LDEFDYSFSENGLTAYRLGKELASQSFINWLGEEKYNKLAVFILRYLSEIDLPKRRGTFL 127
Query: 120 ELRNGIINISPIGRNCSQEERDEFFRYNLKNNTIEKFRDNLSKEFEDFDLNFSMGGQISI 179
E RNG+IN+SPIGRN S EER+EF RY+ ++ KF + L KEF D+ L FS+GGQIS
Sbjct: 128 EFRNGMINVSPIGRNASTEERNEFERYDKEHQIRAKFVEALKKEFPDYGLTFSIGGQISF 187
Query: 180 DCFPK----------------------------GGNDYELFCDKRVKGYKVKNPNDTVKI 211
D FP GGNDYE+F D+R G+ V++P+DTVKI
Sbjct: 188 DVFPAGWDKTYCLQHVEKDGFKEIHFFGDKTMVGGNDYEIFVDERTIGHSVQSPDDTVKI 247
Query: 212 LRENF 216
L E F
Sbjct: 248 LTELF 252
Lambda K H
0.320 0.142 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 228
Number of extensions: 11
Number of successful extensions: 6
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 217
Length of database: 254
Length adjustment: 23
Effective length of query: 194
Effective length of database: 231
Effective search space: 44814
Effective search space used: 44814
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 20 (12.0 bits)
S2: 20 (12.3 bits)