>YDL147W RPN5 SGDID:S000002306, Chr IV from 190925-192262, Verified
           ORF, "Essential, non-ATPase regulatory subunit of the
           26S proteasome lid, similar to mammalian p55 subunit and
           to another S. cerevisiae regulatory subunit, Rpn7p"
          Length = 445

 Score =  250 bits (639), Expect = 6e-71
 Identities = 140/413 (33%), Positives = 250/413 (60%), Gaps = 8/413 (1%)

Query: 49  VEELISLEKKCRQSYDGISTSKICCFILNKYKEVGNYSKVNEYLIFFNKKRGQLKRTIID 108
           +++L+ LEKK RQ+ D  S+ ++   I++       +  +NE L   +KK GQLK +I  
Sbjct: 36  LDQLLVLEKKTRQASDLASSKEVLAKIVDLLASRNKWDDLNEQLTLLSKKHGQLKLSIQY 95

Query: 109 IINLCKGWIEDIQNKE--EKLNLINTLCLVSEGKIFVEVERSEVIRMLSKIKEEDGNIEE 166
           +I     +++  ++ +   ++++I T+ +V+E KIFVEVER+ V + L +IK+E+G I+E
Sbjct: 96  MIQKVMEYLKSSKSLDLNTRISVIETIRVVTENKIFVEVERARVTKDLVEIKKEEGKIDE 155

Query: 167 AANILQDVQVETFISMNKRDKTEYILEQMRLVLLRKDFIRCHVISRKINPSLLNTEEFAD 226
           AA+IL ++QVET+ SM   +K ++ILEQM L +L+ D+ +  V+SRKI        ++  
Sbjct: 156 AADILCELQVETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKNPKYES 215

Query: 227 LKLKYYMYMIQYYINEESYLDVAKCYEERFHTDIVLNDRNLWIDEMKCYIIFLILSPYDE 286
           LKL+YY  +++  +++  YL+VA+  +E + TD + +D   W   +   + FL+LSPY  
Sbjct: 216 LKLEYYNLLVKISLHKREYLEVAQYLQEIYQTDAIKSDEAKWKPVLSHIVYFLVLSPYGN 275

Query: 287 QQNKLSNLLKMQKKKLKEIPIYQNLVQDFIEQDLIQWPLPYQQELFNFFIFDDSIFLGGQ 346
            QN L + ++     LK++   ++LV+ F   +L++WP+   Q+ +   + +D +  GG+
Sbjct: 276 LQNDLIHKIQ-NDNNLKKLESQESLVKLFTTNELMRWPI--VQKTYEPVLNEDDLAFGGE 332

Query: 347 NRK---DLFKKKVMHHNIHVISNCYDQISLNRLAQLLNASIEDSENLLSELVSAKFINSK 403
             K   +  +K+V+ HN+ VIS  Y +I+L RL +LL+ +   +E  +S+LV+   I +K
Sbjct: 333 ANKHHWEDLQKRVIEHNLRVISEYYSRITLLRLNELLDLTESQTETYISDLVNQGIIYAK 392

Query: 404 IDRLNGIIKFGQKKNPENLLNSWSLQINDILDLLEESSHLIQKERMLHEAKLK 456
           ++R   I+ F + KN   LLN WS  ++++L+ +E   HLI KE ++H  + K
Sbjct: 393 VNRPAKIVNFEKPKNSSQLLNEWSHNVDELLEHIETIGHLITKEEIMHGLQAK 445

Lambda     K      H
   0.320    0.137    0.390 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 532
Number of extensions: 28
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 467
Length of database: 445
Length adjustment: 33
Effective length of query: 434
Effective length of database: 412
Effective search space:   178808
Effective search space used:   178808
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 25 (14.4 bits)
S2: 25 (14.2 bits)