Query= PF10_0194 Pf Annotation|Plasmodium_falciparum_TIGR|(protein coding) hypothetical protein (322 letters)
>YOL041C NOP12 SGDID:S000005401, Chr XV from 252645-251266, reverse
           complement, Verified ORF, "Nucleolar protein, required
           for pre-25S rRNA processing; contains an RNA recognition
           motif (RRM) and has similarity to Nop13p, Nsr1p, and
           putative orthologs in Drosophila and S. pombe"
          Length = 459

 Score = 72.0 bits (175), Expect = 3e-17
 Identities = 53/201 (26%), Positives = 99/201 (49%), Gaps = 30/201 (14%)

Query: 69  EEEIAERNKRTIFVGNIPIKDVSISKLLK----------ILNIEKS-------------- 104
           +E+  E+ +RT+F+GNI    ++  K+ K          I   E+S              
Sbjct: 139 KEDELEKAERTVFIGNILSTVITSKKVYKEFKKLFGTNPIAETEESGNEKEEESSKKSDN 198

Query: 105 ---IVETVRFRSLPLEEKYADKKRLGVMRKKFTDVKDNKNALVTLKEEKDVPLLLER-NG 160
               +E++RFRS+  +E  A  +++  +++KF   +D  NA +  K +  V  +    N 
Sbjct: 199 NEFAIESIRFRSISFDE--ALPRKVAFVQQKFHKSRDTINAYIVYKNKSAVRKICSNLNA 256

Query: 161 TVYEGYVLRVNKFGDSKSFSRKKSICIKNLCKKLNEKDLYEIMKDVDTIKGVRILRDTAT 220
            V++ + LRV+         +K+SI + NL  +  E+ L++  +    I+ VRI+RD+ T
Sbjct: 257 VVFQDHHLRVDSVAHPAPHDKKRSIFVGNLDFEEIEESLWKHFEPCGDIEYVRIIRDSKT 316

Query: 221 SMSTGTAFILFESRSAVKKAI 241
           +M  G A++ F+   +V KA+
Sbjct: 317 NMGKGFAYVQFKDLQSVNKAL 337

 Score = 25.0 bits (53), Expect = 0.004
 Identities = 10/34 (29%), Positives = 18/34 (52%)

Query: 221 SMSTGTAFILFESRSAVKKAIQQFNGYTINDRQI 254
           S  T  A+I+++++SAV+K     N     D  +
Sbjct: 231 SRDTINAYIVYKNKSAVRKICSNLNAVVFQDHHL 264

 Score = 15.0 bits (27), Expect = 3.8
 Identities = 6/24 (25%), Positives = 13/24 (54%)

Query: 102 EKSIVETVRFRSLPLEEKYADKKR 125
           ++S    V  RS+  ++  A+K +
Sbjct: 435 QRSATGRVTKRSIAFKKAQAEKSK 458
Lambda     K      H
   0.314    0.132    0.348 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 304
Number of extensions: 17
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 3
Length of query: 322
Length of database: 459
Length adjustment: 30
Effective length of query: 292
Effective length of database: 429
Effective search space:   125268
Effective search space used:   125268
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 24 (13.8 bits)
S2: 24 (13.9 bits)