Query= PF10_0197 Pf
Annotation|Plasmodium_falciparum_TIGR|(protein coding) hypothetical
protein
(601 letters)
>YNL022C YNL022C SGDID:S000004967, Chr XIV from 592900-591428,
reverse complement, Uncharacterized ORF, "Non-essential
protein with similarity to S. pombe hypothetical protein
E349594"
Length = 490
Score = 47.0 bits (110), Expect = 2e-09
Identities = 37/128 (28%), Positives = 55/128 (42%), Gaps = 20/128 (15%)
Query: 166 NNKSEHIINELMKKNI------------HIEMDEDVEFLYKINNKDVYKLINHYIYKENK 213
N ++E ++ EL KK I DE + L+ I+ D K+ H +YK K
Sbjct: 166 NGETEPVLAELRKKFTLKVDKWSELVPGSIYYDEFIPNLFGIHPSD--KITAHELYKHGK 223
Query: 214 IRIIDKTSCLVVQAANIKRGMIIVDVCSSPGSKA------IFSRTLLNKKGYLICIEKDR 267
I I D+ SC N I++D CS+PG+K I+ + + EKD
Sbjct: 224 IIIQDRASCFPAHILNPGPSDIVIDSCSAPGNKTTHTASYIYPEPPKDNNTRIYAFEKDP 283
Query: 268 KRCYTLLK 275
+R L K
Sbjct: 284 ERAKVLQK 291
Score = 42.4 bits (98), Expect = 5e-08
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 464 NKFDEHKNNSFSDDVLKGNIPKVPTCFINK------VNKLSEFQKNILTHAINIFKTAKI 517
+ F+ K + DD G +P FI K + KLS FQ ++ HA++ F AK
Sbjct: 342 DSFNRRKIDDKDDD--GGIVPDEQEEFIAKEELQTRLAKLSSFQFQMVKHAMS-FPAAKK 398
Query: 518 FIYSTCSFFEEENEQVI 534
+YSTCS EENE+V+
Sbjct: 399 IVYSTCSIHAEENERVV 415
Score = 23.5 bits (49), Expect = 0.022
Identities = 10/30 (33%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Query: 355 DFFNLTSQDFSTFPNIDVVFIDPSCSSSGM 384
DF L + + + ++ +DPSCS SG+
Sbjct: 308 DFTKLATPE--KYKDVTCFIVDPSCSGSGI 335
Score = 15.0 bits (27), Expect = 7.8
Identities = 8/24 (33%), Positives = 11/24 (45%)
Query: 195 INNKDVYKLINHYIYKENKIRIID 218
+N D KL YK+ I+D
Sbjct: 304 VNVGDFTKLATPEKYKDVTCFIVD 327
Score = 15.0 bits (27), Expect = 7.8
Identities = 3/8 (37%), Positives = 6/8 (75%)
Query: 259 YLICIEKD 266
+ +C E+D
Sbjct: 483 FAVCFERD 490
Lambda K H
0.319 0.137 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 715
Number of extensions: 45
Number of successful extensions: 6
Number of sequences better than 10.0: 1
Number of HSP's gapped: 6
Number of HSP's successfully gapped: 5
Length of query: 601
Length of database: 490
Length adjustment: 35
Effective length of query: 566
Effective length of database: 455
Effective search space: 257530
Effective search space used: 257530
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 27 (15.3 bits)
S2: 27 (15.0 bits)